Transcript Information: S_Transcript_48516.p1


Annotated TAIR IDAT3G25070.1
Annotated Gene NameRPM1 interacting protein 4
Annotated Gene Symbol(s)RIN4
Annotation TypeHomolog
Chromosome Positionchr3:9132458-9133747 | Forward length=211
E-Value7E-21
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.3015157234982
Replicate 29.0514008441086
Replicate 39.6942587106105
Condition 2: 8 Hour
Replicate 121.544112269104
Replicate 220.077300061293
Replicate 315.358341479487
Condition 3: 24 Hour
Replicate 110.194278962277
Replicate 27.3221545092815
Replicate 37.0492380516863


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_48516.p1 GENE.S_Transcript_48516~~S_Transcript_48516.p1 ORF type:internal len:390 (+),score=97.36,AvrRpt-cleavage|PF05627.7|0.00011,AvrRpt-cleavage|PF05627.7|1.9e-05,AvrRpt-cleavage|PF05627.7|0.011,AvrRpt-cleavage|PF05627.7|0.075,AvrRpt-cleavage|PF05627.7|8.9e-12 S_Transcript_48516:3-1169(+)
CCCCACCCCTGTCTTGAACTTAACCTCTCTCCCCTGTTTCTGAAGTTTTCCTTGCAAAAGTTTGGTGCTTTCATCATGGCTTCCAAAGTTCCAAAGTTTGGTGCTTGGGAGGGTGGGGAAAACTATACAGTTTGCTTCGATAATGCTCGAAAGACCAAGAACAATGGAGCCATGATAAACCCAAACGACCCTGAAGAAAACCCAGATATGTTCCAACAGGATGGAGGTTCAGTTCAAGCTCCCCCAGCACACAACAGAACCGATTCACAGGCATCACAGCAATCCAAAGTACCCCAGTTTGGCGCCTGGGACAGTGGAGACAATGTTGGTTACACTGTTTATTTTGAAAAGGCTCGGAAAACTAAGAATGATCCGCCCACAAAGCCTGAAAACGAGCCCCAGCCAAACCAGAACACAAATCCTCGCAAGAAATCTCCAGCTCAGACTCGCCTTGCTGCAATCAAACCTGAGCCACAAGTAGCACAGTCCAAGGTACCACAGTTTGGCGCTTGGGAAGGGGAAGGGGAAGCTCAGTACACTATGTGCTTTGAAAATGTTCGGAAGAATAAGAATGGCGTTGCTGCCACAGAGGAGCCCTCTAAGGCAAATCAACCAAACCGGGGCACAAGTCCACCACAGAATGAGCCTCAAGCTGAAAAGCCTCGTTCTAAGGTGCCCCAGTTTGGCGCTTGGGATGGGGGAGAGAATGTTCAATACACGGCTTACTTTGATGGTGCTAGGAAGAATAAAGAGGAACCATTGGAGCCCCAGCTGAATCGTGATGTTGCTGACAGGTCTAGGCCACCTTCTGCTGGAGGAGGGGCTAGGCCCAAGCCTGAGCAGATAGGGACCAAGGAAGGAGGTGATTCGAGAAATGCAAGCCGTGGTTCAGAAAGCTCTCAGAAGCCAGGCCGACCAGCTCTTGGGGGTCAGTCACCGCACAATTCAAGAGGGAAGCCTCAACCAAAACCTGTCAGTCGAGGGAGTCAGAGTCCTGAGAAAGGGACAGCCATTCCACAATGGGGTGTATGGAACACAGATCCAGCACAAGCTGAGGGTTTTACAGGTGCATTCACAAGGGCTCGGGAGGATAGAATGACACCGCAAAACAGAAACACTCCCTCTTCTTATCGCCAGCAAGGTCATCACTCCGATGAGGAGCCCAAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_48516.p1 GENE.S_Transcript_48516~~S_Transcript_48516.p1 ORF type:internal len:390 (+),score=97.36,AvrRpt-cleavage|PF05627.7|0.00011,AvrRpt-cleavage|PF05627.7|1.9e-05,AvrRpt-cleavage|PF05627.7|0.011,AvrRpt-cleavage|PF05627.7|0.075,AvrRpt-cleavage|PF05627.7|8.9e-12 S_Transcript_48516:3-1169(+)
PHPCLELNLSPLFLKFSLQKFGAFIMASKVPKFGAWEGGENYTVCFDNARKTKNNGAMINPNDPEENPDMFQQDGGSVQAPPAHNRTDSQASQQSKVPQFGAWDSGDNVGYTVYFEKARKTKNDPPTKPENEPQPNQNTNPRKKSPAQTRLAAIKPEPQVAQSKVPQFGAWEGEGEAQYTMCFENVRKNKNGVAATEEPSKANQPNRGTSPPQNEPQAEKPRSKVPQFGAWDGGENVQYTAYFDGARKNKEEPLEPQLNRDVADRSRPPSAGGGARPKPEQIGTKEGGDSRNASRGSESSQKPGRPALGGQSPHNSRGKPQPKPVSRGSQSPEKGTAIPQWGVWNTDPAQAEGFTGAFTRAREDRMTPQNRNTPSSYRQQGHHSDEEPK

Click here to download the sequence:
Link to NCBI Protein BLAST