Transcript Information: S_Transcript_485421.p2


Annotated TAIR IDAT3G28730.1
Annotated Gene Namehigh mobility group
Annotated Gene Symbol(s)ATHMG, SSRP1, NFD, HMG
Annotation TypeHomolog
Chromosome Positionchr3:10784954-10788498 | Forward length=646
E-Value2E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1672368962799
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_485421.p2 GENE.S_Transcript_485421~~S_Transcript_485421.p2 ORF type:complete len:114 (+),score=50.39,HMG_box|PF00505.15|3.3e-26,HMG_box_2|PF09011.6|1.5e-18 S_Transcript_485421:23-364(+)
ATGCCAAAGAAAGCAGCAGCAAAAGATACCAAGAAGAAGACCACCACCAAGAAGAAAAAAGACCCAAATGCACCAAAGAGAGCACTCTCTGCATACATGTTCTACTCTAAGGAGAAGAGACCTGTTTTGAAGGAGGAAGAGCCAACTCTCAAGTTCGGAGAAATCGCAAAGAAGCTCGGACAAATGTGGAAGGATTTGGATGAGGAAGAGAAGAAGCCTTACGTCCAACAAGCTGAAGAAGACAAGGAGAGATATAAGAAAGAAAAGGAAGAGTACGACAGCAAGCAAGACGAGAGAGGTGATGATGACGAAGACAACGAAGATGAAGATGATGATGAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_485421.p2 GENE.S_Transcript_485421~~S_Transcript_485421.p2 ORF type:complete len:114 (+),score=50.39,HMG_box|PF00505.15|3.3e-26,HMG_box_2|PF09011.6|1.5e-18 S_Transcript_485421:23-364(+)
MPKKAAAKDTKKKTTTKKKKDPNAPKRALSAYMFYSKEKRPVLKEEEPTLKFGEIAKKLGQMWKDLDEEEKKPYVQQAEEDKERYKKEKEEYDSKQDERGDDDEDNEDEDDDE*

Click here to download the sequence:
Link to NCBI Protein BLAST