Transcript Information: S_Transcript_485517.p1


Annotated TAIR IDAT4G14180.1
Annotated Gene Nameputative recombination initiation defect 1
Annotated Gene Symbol(s)AtPRD1, PRD1
Annotation TypeHomolog
Chromosome Positionchr4:8178330-8183515 | Forward length=1268
E-Value5E-73
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.22746154901864
Replicate 20.06285695030631
Replicate 30.10508681529117
Condition 2: 8 Hour
Replicate 10.06075609776961
Replicate 20.19121238153612
Replicate 30.12145782111101
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.1437153527357


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_485517.p1 GENE.S_Transcript_485517~~S_Transcript_485517.p1 ORF type:internal len:351 (+),score=49.22 S_Transcript_485517:1-1050(+)
CACGTTCTTCTTGGCGCCTATTATTCATTTGCTCCCTTTCACTCTACCCTCTCCTTTCTCTCTCCTCTCCTCCACATCACCACCACCTCCTCCAACATGAACCACCACCACCACCGTTACTACCACCAAGACTCTCAATTCCACAACCACCACCACCACAATCCACAAAACTCACTTCCAGAACCTTCTTCTTCTTCATCATCAACCTGCGACCAAGGTCACCGAACTTCTCTCCTCCTCAAAACACAACAAGGAGGCACAATCTGCTTGCTCTGCTTCTCCAACCTCATCTCAAACCCTAATTCTCCCAAATTCCACGTCTCCTATGCTCTCTCTCAGTTCTCTCATGCTATTTCTCAACCGCATTTCCTCAAATGTCTCCTCTCGTTCCATGTCCACCTCATTCTCTCTCCTCTCGTGCAGTCTCTCTCCTCGTTTGATGATGATCAGATTGCCGGACAAGTCACGGAGATCGTCACCGAGATTTTCGGTGCCTGTGGTTCTGAGGTTTCCGGCGACTTTGTTGCGAGGATCACTGATTTGCTTTGCTCTGGTTCCTTGACTTGGAGCCGACGTCAAGTCTACTCGCTACATTGCCTTGGAGTTCTTTTGACTCAACAGACGGATGCGTATGCTTGTATCAAAGATAAAGCTGTCCTGATCTACAATCTGGTTGTCGGTCTTCAGTTGCCAAGTGAGGAAATCCGGGGGGAGATCTTTTTTGTCTTGTACAGAATATGTATCCTTCAGCTAAGCAGTAACGACGAGGAAGGTGCTAATGTATTGCTTGAATATTGTCCCACACTCTTACGCTTGTCCTTGGATGCCCTTATGAAGACTCAAAGAGATGATGTTCGCTTGAACTGTATAGCACTTCTGGAGGTGCTGGGGCAAAGAGAATTCCTCTCAAATGCTTTTTTGAGCGACTTCAACAAGATGGATACCTGTGAAGCTGACAGCTGCATGCAAACCACTGATGAAGAAATAGATTGCACCTCGCTTAGTAGATTGTTTGCAGAGGCTATTAAGTCACCGCTGCTCTCTCCAGAC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_485517.p1 GENE.S_Transcript_485517~~S_Transcript_485517.p1 ORF type:internal len:351 (+),score=49.22 S_Transcript_485517:1-1050(+)
HVLLGAYYSFAPFHSTLSFLSPLLHITTTSSNMNHHHHRYYHQDSQFHNHHHHNPQNSLPEPSSSSSSTCDQGHRTSLLLKTQQGGTICLLCFSNLISNPNSPKFHVSYALSQFSHAISQPHFLKCLLSFHVHLILSPLVQSLSSFDDDQIAGQVTEIVTEIFGACGSEVSGDFVARITDLLCSGSLTWSRRQVYSLHCLGVLLTQQTDAYACIKDKAVLIYNLVVGLQLPSEEIRGEIFFVLYRICILQLSSNDEEGANVLLEYCPTLLRLSLDALMKTQRDDVRLNCIALLEVLGQREFLSNAFLSDFNKMDTCEADSCMQTTDEEIDCTSLSRLFAEAIKSPLLSPD

Click here to download the sequence:
Link to NCBI Protein BLAST