Transcript Information: S_Transcript_485862.p1


Annotated TAIR IDAT5G42905.1
Annotated Gene NamePolynucleotidyl transferase, ribonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:17201414-17202323 | Reverse length=258
E-Value7E-44
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.26349506173446
Replicate 20.145628973977
Replicate 30.36520269472476
Condition 2: 8 Hour
Replicate 10.35190413064576
Replicate 20.14766896791899
Replicate 30.14069866405928
Condition 3: 24 Hour
Replicate 10.072095325051466
Replicate 20.22439417402324
Replicate 30.24972321193184


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_485862.p1 GENE.S_Transcript_485862~~S_Transcript_485862.p1 ORF type:5prime_partial len:303 (+),score=38.07,RVT_3|PF13456.2|2.2e-20 S_Transcript_485862:2-910(+)
GCGGATTCGCCAACCTGTGAATATTGTGGCCTACAACCCGAAGACACTCTCCATGTCCTTCGGGATTGCCACGCAGCTTCTACAGTATGGAATAAATTTGTAAAGCAGCAAGCAAGGGTGGAGTTCTACACGTGGACGCTTCGTGACTGGGTATATGTCAACTGCACAGGAACACTTGGGAAGGACCCTACTACGGATTGGCCCCGTCTCTTTTTCACCATAATGTGGTTCATTTGGCGCTGGAGGTGTTACAGAGCTTTTGGTGGTCATACACGCATTCCTTTTGATCAAGGGGGCTATATTTCTACCCAGTACAAACAAATTTCCAAAGCTTTGGATGAAAATAATGAAGGGCCTGATGTTCCCATCCCTCGGGTCCTTACTTTCATCAGATGGCTCTATCCCCCTCAGGGCTGGGTTAAGTTAAATACAGATGGTGCATCAAAAGGTAATCCTGGGAATGCGAGTGCTGGAGGGGTACTACGTGATAGTTTGGGTCAATGGCTCCGAGGATTTGCGCAGAATATTGGGGTCTGTTCGTCAGTTACTGCAGAACTTTGGGGAGTCTTCACTGGATTACAAATGGCATGGGATATTGGAGTGAGACGAATTATCTTGGAAGTGGATTCCTTATTGGTGAAAAATTTCCTCACTGACGACGTAGATTGGAGTGGGAATAATGTAAACCTGGTTGTATCTTGTAAAGAAGTGCTCAGAAGACCTTGGGAAATTAGAGTTGAACACATATACAGAGAAGCAAATGGGGTTGCAGATGCACTTGCAAACAAGGCCCTCACACTGGCAGTTGGAGTCCATTACTATGATAGCCCTCCGTTGGGAATTACTTCTCTTGTTTTTCAGGATATTAGTGGAGTAGCTTTTCCACGCTTAGTTAGTACTTTAATTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_485862.p1 GENE.S_Transcript_485862~~S_Transcript_485862.p1 ORF type:5prime_partial len:303 (+),score=38.07,RVT_3|PF13456.2|2.2e-20 S_Transcript_485862:2-910(+)
ADSPTCEYCGLQPEDTLHVLRDCHAASTVWNKFVKQQARVEFYTWTLRDWVYVNCTGTLGKDPTTDWPRLFFTIMWFIWRWRCYRAFGGHTRIPFDQGGYISTQYKQISKALDENNEGPDVPIPRVLTFIRWLYPPQGWVKLNTDGASKGNPGNASAGGVLRDSLGQWLRGFAQNIGVCSSVTAELWGVFTGLQMAWDIGVRRIILEVDSLLVKNFLTDDVDWSGNNVNLVVSCKEVLRRPWEIRVEHIYREANGVADALANKALTLAVGVHYYDSPPLGITSLVFQDISGVAFPRLVSTLI*

Click here to download the sequence:
Link to NCBI Protein BLAST