Transcript Information: S_Transcript_48600.p1


Annotated TAIR IDAT1G79320.1
Annotated Gene Namemetacaspase 6
Annotated Gene Symbol(s)AtMC6, MC6
Annotation TypeOrtholog
Chromosome Positionchr1:29836686-29837908 | Forward length=368
E-Value2.8E-76
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 147.305077137007
Replicate 249.654193828505
Replicate 339.77929726697
Condition 2: 8 Hour
Replicate 151.890118359488
Replicate 247.468137863214
Replicate 353.5142590926
Condition 3: 24 Hour
Replicate 149.573049420107
Replicate 248.140695783951
Replicate 344.478218822137


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_48600.p1 GENE.S_Transcript_48600~~S_Transcript_48600.p1 ORF type:complete len:427 (+),score=89.70,Peptidase_C14|PF00656.18|2.3e-75 S_Transcript_48600:108-1388(+)
ATGGGAAAGAAAGCAGTGCTGATAGGAATCAACTACCCAGGAACAAAAGCAGAGCTAAAAGGATGCATAAACGATGTAAGCCGAATGTACCGTTGTTTGATAGAGCGTTACGGGTTTGAAGAAGAAGACATAAGAGTTTTGATAGATACAGACCCGTCGTACACTCAACCAACAGGCAAGAACATCAGACGGGCTCTTCAGACTTTGGTCCGATCTGCTGAATCGGGTGATTCTCTTTTTGTTCATTATAGTGGTCATGGGACTCGCTTGCCTGCTGAGACTGGTGAACATGATGATACTGGCTATGATGAGTGTATTGTTCCTTGCGACATGAATCTCATCACAGATGAAGATTTCAAGGAGCTGGTATGCAAAGTCCCTGATGGTTGTCGGATCACAATAGTCTCAGACTCATGCCATAGCGGAGGCCTAATTAGCGGAGCCAAAGAGCAAATAGGAGAAAGCTTCCACACAGGTGGTGGTGACAGCAGCCATGGCTCCTCGGGGTCATTCAGCTTGTCAGGCTTCTTGAAACAGACAGTGAAGGACACTGTCAGGGACGCCATCCAGTCGAGAGGAATCGACCTCCCTAGCTCCCATCACCACCATGGAAGCAGGGGTTACTATGAGCCTGAGCATAGAGTCTTTGAGGAGGACTATCACTACTCAAACTGGGGCTATGTCAAGAGCAAGTCCCTCCCTATATCAACCCTCATCGAGATGCTTAAAGAGAAGACGGGCAAGGATGACATCGATGTGGGCAAGATCCGACCCACCCTTTTTGACATCTTTGGGGAGGACTCGAGCCCCAAAGTCAAGAAGTTCATGAAAATCATCCTTAACAAGCTTCATGGAGGCGGAGGAGAGGGGTCAGGATCAGGGTCAATTTTGGCCGCAGTTGGTGGGCTTGCACTCGAGTTCATGAAGCAGAAGCTGGAGGAGAAGGATGAGGAGTACGTCAAACCTGCATTGGATACTGAGGTCGAGAGCTCTGAAGAAGTCTATGCTGGTTCCAACAAAGAGTTGCCGAGGAATGGGATTCTTCTCAGTGGATGTCAGTCCAACCAGACATCAGCTGATGCTAGTCCTTCTGGGAATGCACATGAAGCATATGGAGCTTTCAGCAATGCAATCCAGACTATATTGCACGAGTCAGGGGACGAGGTAAGCAACGAACAAGTTGTGATGAATGCCAGGAAGTTGCTCAAGAGACAAGGGTTTACTCAGCACCCTGGGCTTTACTGCAGTGATGACTATGTTGAGGTTCCTTTCGTTTGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_48600.p1 GENE.S_Transcript_48600~~S_Transcript_48600.p1 ORF type:complete len:427 (+),score=89.70,Peptidase_C14|PF00656.18|2.3e-75 S_Transcript_48600:108-1388(+)
MGKKAVLIGINYPGTKAELKGCINDVSRMYRCLIERYGFEEEDIRVLIDTDPSYTQPTGKNIRRALQTLVRSAESGDSLFVHYSGHGTRLPAETGEHDDTGYDECIVPCDMNLITDEDFKELVCKVPDGCRITIVSDSCHSGGLISGAKEQIGESFHTGGGDSSHGSSGSFSLSGFLKQTVKDTVRDAIQSRGIDLPSSHHHHGSRGYYEPEHRVFEEDYHYSNWGYVKSKSLPISTLIEMLKEKTGKDDIDVGKIRPTLFDIFGEDSSPKVKKFMKIILNKLHGGGGEGSGSGSILAAVGGLALEFMKQKLEEKDEEYVKPALDTEVESSEEVYAGSNKELPRNGILLSGCQSNQTSADASPSGNAHEAYGAFSNAIQTILHESGDEVSNEQVVMNARKLLKRQGFTQHPGLYCSDDYVEVPFVC*

Click here to download the sequence:
Link to NCBI Protein BLAST