Transcript Information: S_Transcript_48604.p5


Annotated TAIR IDAT1G79330.1
Annotated Gene Namemetacaspase 5
Annotated Gene Symbol(s)AMC6, ATMCP2B, ATMC5, MC5
Annotation TypeOrtholog
Chromosome Positionchr1:29838722-29840137 | Forward length=410
E-Value2E-43
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.5484001646907
Replicate 24.8328015221223
Replicate 33.1616119000458
Condition 2: 8 Hour
Replicate 19.7487498592608
Replicate 26.1788915290674
Replicate 37.1052825349938
Condition 3: 24 Hour
Replicate 13.7448371698161
Replicate 23.4535331925863
Replicate 33.8433591474463


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_48604.p5 GENE.S_Transcript_48604~~S_Transcript_48604.p5 ORF type:5prime_partial len:105 (+),score=29.08,Peptidase_C14|PF00656.18|4.9e-19 S_Transcript_48604:1-315(+)
GCTATGGAAACTCACATTGAGAGAAAACAGGATGCGTATGCTGGGATTACCAGGGAACTTCCGAAGAATGGAATGCTCCTCAGCGGATGCCAAACAGACCAAACATCTGCAGATGCTAGCCCTGGAGGCAACACTCGTGAAGCTTATGGAGCTTTCAGCAATGCAATTCAGGCGGTTCTTGCTGAATCAGAAGGGAGAATTTCTAATGAAGAACTTGTCATGAGAGCAAGGAAGATGCTAAAACACCAAGGTTTCACTCAGCAACCTGGGCTTTACTGCAGTGACAAAAATCTTGATGCTCCCTTTGTTTGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_48604.p5 GENE.S_Transcript_48604~~S_Transcript_48604.p5 ORF type:5prime_partial len:105 (+),score=29.08,Peptidase_C14|PF00656.18|4.9e-19 S_Transcript_48604:1-315(+)
AMETHIERKQDAYAGITRELPKNGMLLSGCQTDQTSADASPGGNTREAYGAFSNAIQAVLAESEGRISNEELVMRARKMLKHQGFTQQPGLYCSDKNLDAPFVC*

Click here to download the sequence:
Link to NCBI Protein BLAST