Transcript Information: S_Transcript_48611.p1


Annotated TAIR IDAT5G18450.1
Annotated Gene NameIntegrase-type DNA-binding superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:6116097-6117020 | Reverse length=307
E-Value1.9E-40
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.8975314773075
Replicate 26.4349802876085
Replicate 37.9406224804391
Condition 2: 8 Hour
Replicate 13.9985106844624
Replicate 26.3697624599222
Replicate 34.9588951025477
Condition 3: 24 Hour
Replicate 14.9302688433633
Replicate 24.957708782326
Replicate 35.7800518428391


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_48611.p1 GENE.S_Transcript_48611~~S_Transcript_48611.p1 ORF type:complete len:288 (+),score=82.39,AP2|PF00847.16|1.6e+04,AP2|PF00847.16|1.1e-12 S_Transcript_48611:858-1721(+)
ATGGGAACTTTGAATTTCAATGAAGCTTCTTCTAACCCAGCTTCTTCTTCTATACCCTTTGATTACACCAGGAAGAGGAAGTCTTGGAGTAGGCGTGATGGCTCTACTACTAATTCAGTGGCTGAAACCCTTGCTAAATGGAAAGAAATTAACAGCAAACTCGAGGAGGGGAAGCCTGTTCGTAAACCCCCTGCTAAGGGTTCAAAGAAAGGATGTATGAAAGGTAAAGGTGGTCCTGACAATGCTCGGTGCAATTATAGAGGAGTTAGGCAGAGGACTTGGGGTAAATGGGTTGCTGAGATCAGAGAGCCAAACAGAGGTAGTAGGCTCTGGCTTGGTACTTTCCCTACTGCCGTTGAAGCTGCTTTGGCTTATGATGAGGCTGCAAGGACCATGTATGGACAGACTGCTCGCTTGAACTTACCTAATTACCCTTCTTCTCCATTGAGGGATTCTTTTGAGAGAACAACTACTACCACTACATCGTATACTGAGTCTTCTGATAATCATTCTGAAGTGTGTGGGGGTGATCAGCCAGAGCCTGAGTTGAAGATTTGTAGGACGTCAAAGCAAGAAGATGGTGAAAGTGAATCAGTATTCAACCTTGACGGAGCTCAAATAGCATTTGAGGCAGGGGCTTTGGCCATTCCTGTCAAGAAGGAACCAGCACAACAGGAGGCTGACAATGTGGAAGGCTGTATCGACATCAATGACTACTTGCAGAACTTCCCAATGGATCAGAACTTCCCAACAGATCAGAACTTCCCAATGGATCAGAACTTCCCAACAGATCAGAACTTTCCAATGGATCAGAACTTTTCGGTGGATGAAATGTTTGATGTCGATGAGCTTCTGGGGTGTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_48611.p1 GENE.S_Transcript_48611~~S_Transcript_48611.p1 ORF type:complete len:288 (+),score=82.39,AP2|PF00847.16|1.6e+04,AP2|PF00847.16|1.1e-12 S_Transcript_48611:858-1721(+)
MGTLNFNEASSNPASSSIPFDYTRKRKSWSRRDGSTTNSVAETLAKWKEINSKLEEGKPVRKPPAKGSKKGCMKGKGGPDNARCNYRGVRQRTWGKWVAEIREPNRGSRLWLGTFPTAVEAALAYDEAARTMYGQTARLNLPNYPSSPLRDSFERTTTTTTSYTESSDNHSEVCGGDQPEPELKICRTSKQEDGESESVFNLDGAQIAFEAGALAIPVKKEPAQQEADNVEGCIDINDYLQNFPMDQNFPTDQNFPMDQNFPTDQNFPMDQNFSVDEMFDVDELLGC*

Click here to download the sequence:
Link to NCBI Protein BLAST