Transcript Information: S_Transcript_486660.p1


Annotated TAIR IDAT4G13320.1
Annotated Gene Nameunknown protein; Has 68 Blast hits to 67 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 68; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:7753436-7754086 | Forward length=216
E-Value4E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.066340777279139
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.076675710809285
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_486660.p1 GENE.S_Transcript_486660~~S_Transcript_486660.p1 ORF type:5prime_partial len:278 (-),score=54.70,Asp_protease_2|PF13650.2|2.2e-08 S_Transcript_486660:155-988(-)
TCCAAAGAAGGTCCCAAGGATCAAACTCAAAGGGAGAACATCTTTCACACTTGGTGTACCATTCAAGGAAAGGTTTGCTCTATGATTGTGGATGGAGGGAGTTGTGCTAATGCCGCCTCAACTAACCTAGTGGAGAAGCTTGGTTTGAACACCACAAAGCATCCCAACCCTTACAAATTTCAATGGCTCAACAAAGGTAACGAGGTTAAGGTAACTCGCCAAGTTTCTATTCCTTTCTCTATTGGCAATGTGTATAGGGATGAAGTTGTGTGTGATGTGGTACCTATGGATACTTGTCATTTGCTATTGGGTAGACCATGGATGTTTGATAGATATGTGTGGCATAACGGAAGGGCTAATACCTACTCATTGTTCGTTAATGGGAAAAAGATTGTTGTGACCCCTCTTGATCCGAAAGTTGTGATAGAGTCTAGTGATCAAACTAAGACCATGTTCATGAGCAAGGGAGAGTTGAGGGCTGAATTTGCTTCTATTGATGTTGTGTTTGCTCTCATTGTTGTGGAGGAGAATGAGATCCTAGGGGAGGCCAAAGTCCCAAGTGAAGTTGTGCCTCTTCTAAGCAAGTTCCATGATGTCTTCCCTAAGCTTGGACTTCCACCTGTAAGGGGTATTGAGCATCAAATTGATGTAATCCCAGGCTCAATGTTAACTAACAAGGCAACCTATAGGTACACCCCAGAGGAGTCTAAGGAGTTGCAAAGGCAAGTAGAGAAGTTGATTGAAAGGGGCTATATAAAGCCTAGCTTAAGTCCTTGCTCGGTTCCTGCCTTGTTAGTCCCTAAGAAGGATGGAACTATGAGAATGTGTGGATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_486660.p1 GENE.S_Transcript_486660~~S_Transcript_486660.p1 ORF type:5prime_partial len:278 (-),score=54.70,Asp_protease_2|PF13650.2|2.2e-08 S_Transcript_486660:155-988(-)
SKEGPKDQTQRENIFHTWCTIQGKVCSMIVDGGSCANAASTNLVEKLGLNTTKHPNPYKFQWLNKGNEVKVTRQVSIPFSIGNVYRDEVVCDVVPMDTCHLLLGRPWMFDRYVWHNGRANTYSLFVNGKKIVVTPLDPKVVIESSDQTKTMFMSKGELRAEFASIDVVFALIVVEENEILGEAKVPSEVVPLLSKFHDVFPKLGLPPVRGIEHQIDVIPGSMLTNKATYRYTPEESKELQRQVEKLIERGYIKPSLSPCSVPALLVPKKDGTMRMCG*

Click here to download the sequence:
Link to NCBI Protein BLAST