Transcript Information: S_Transcript_486687.p1


Annotated TAIR IDAT3G49910.1
Annotated Gene NameTranslation protein SH3-like family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:18504311-18504751 | Forward length=146
E-Value1E-28
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.13560835355589
Condition 2: 8 Hour
Replicate 10
Replicate 20.16449888705681
Replicate 30.7836708678302
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_486687.p1 GENE.S_Transcript_486687~~S_Transcript_486687.p1 ORF type:3prime_partial len:136 (+),score=12.91,Ribosomal_L26|PF16906.1|6.2e-33 S_Transcript_486687:1-405(+)
ATGAAACGCAGTGATACCGTAAGTTCATCTCGACGAAAATCCCGAAAAGCTCACTTCGGAGCCACTTCTGTTAAAAGAAGAGTCCTCCTTTCTGCTTCTCTCTCCAAAGAGCTCCGAACCAAATACGGTGTTAGATCTGTCCCAATTAGAAAAGATGATGAAGTCCTTGTTGTTCGAGGTGCCAAAAAGAACACCGTCTCTGGAAAAGTCACCACCGTATACAGAAAGAAATTTATTGTTCATATCGACAAATTCTCCCGAGAAAATGCTAAACAACAAACTGTTAACATCGGTGTTCACCCATCAAATTTAGTTATCACCAAGTTAAAGTTAGATAAAGATAGACTCTCTTTATTAGACAGAAAGAGACGAACTGCTCTCGACAAAGGCAAAATTTCTGTTGAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_486687.p1 GENE.S_Transcript_486687~~S_Transcript_486687.p1 ORF type:3prime_partial len:136 (+),score=12.91,Ribosomal_L26|PF16906.1|6.2e-33 S_Transcript_486687:1-405(+)
MKRSDTVSSSRRKSRKAHFGATSVKRRVLLSASLSKELRTKYGVRSVPIRKDDEVLVVRGAKKNTVSGKVTTVYRKKFIVHIDKFSRENAKQQTVNIGVHPSNLVITKLKLDKDRLSLLDRKRRTALDKGKISVE

Click here to download the sequence:
Link to NCBI Protein BLAST