Transcript Information: S_Transcript_48669.p1


Annotated TAIR IDAT5G54090.1
Annotated Gene NameDNA mismatch repair protein MutS, type 2
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:21948283-21952550 | Reverse length=796
E-Value4E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.55156973893787
Replicate 30.69160260313502
Condition 2: 8 Hour
Replicate 11.0662695158566
Replicate 20.27964810799658
Replicate 31.3322404753113
Condition 3: 24 Hour
Replicate 10.54612208726485
Replicate 20.56659528940868
Replicate 30.6305511101279


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_48669.p1 GENE.S_Transcript_48669~~S_Transcript_48669.p1 ORF type:5prime_partial len:80 (+),score=8.18 S_Transcript_48669:3-242(+)
TCAAATGCAATAAATATAGCAGAAAGGTTAGGATTTCCAAAATCAATTTTATGTAATGCTCGTCAACTGTATGGAGTTGCCAGTGCAGAGGTAGATGAGGTAATATTTCTGGTTGTGCTAATGGCTTCATTCCCTGCATATCAAATGTTGTCGCAGATGGGAACTTGTAACTTGAATATTGAACTTTCTTTTAAGGAAAGTAGGAAACTAATAATACTGCTTTCATTTTTACGTGGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_48669.p1 GENE.S_Transcript_48669~~S_Transcript_48669.p1 ORF type:5prime_partial len:80 (+),score=8.18 S_Transcript_48669:3-242(+)
SNAINIAERLGFPKSILCNARQLYGVASAEVDEVIFLVVLMASFPAYQMLSQMGTCNLNIELSFKESRKLIILLSFLRG*

Click here to download the sequence:
Link to NCBI Protein BLAST