Transcript Information: S_Transcript_48675.p1


Annotated TAIR IDAT2G30570.1
Annotated Gene Namephotosystem II reaction center W
Annotated Gene Symbol(s)PSBW
Annotation TypeOrtholog
Chromosome Positionchr2:13019326-13020053 | Reverse length=133
E-Value9.5E-46
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11775.1066079349
Replicate 21867.2849994116
Replicate 32068.6826671291
Condition 2: 8 Hour
Replicate 11863.7145858907
Replicate 21814.4059141314
Replicate 31743.5429800104
Condition 3: 24 Hour
Replicate 12008.9320226131
Replicate 22049.1725109213
Replicate 32073.3625116089


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_48675.p1 GENE.S_Transcript_48675~~S_Transcript_48675.p1 ORF type:complete len:137 (+),score=37.52,PsbW|PF07123.8|3e-55 S_Transcript_48675:289-699(+)
ATGGCCACCATTACTGCCAGCTCTTCAGCATCTCTGGTTTCACGTGCCAGTCTCGTGCACAACAGAAGGGTTGGAGTTTCATCCTCACCTGTCCTTGGATTGCCAGCAATGACAAAGAAGGGCAAGGTAACATGCTCAATGGAGGAGAAGCCATCATCAAACCAAGAGAAGAGCTCAAACACAAGCATGGGAGCCTCATTGCTCGCGGCAGCTGCTGCAGCCACCATGTCGAGCCCAGCCATGGCTCTGGTTGATGTGAGAATGAGCACAGAAGGAACTGGTCTTCCTTTCGGGTTGAGCAACAACCTTCTTGGTTGGATCCTTTTGGGTGTCTTTGCTCTCATCTGGGCTTTCTACTTCACCTACGTTTCGAATCTTGAGGAAGATGAGGAGTCTGGAATGTCCCTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_48675.p1 GENE.S_Transcript_48675~~S_Transcript_48675.p1 ORF type:complete len:137 (+),score=37.52,PsbW|PF07123.8|3e-55 S_Transcript_48675:289-699(+)
MATITASSSASLVSRASLVHNRRVGVSSSPVLGLPAMTKKGKVTCSMEEKPSSNQEKSSNTSMGASLLAAAAAATMSSPAMALVDVRMSTEGTGLPFGLSNNLLGWILLGVFALIWAFYFTYVSNLEEDEESGMSL*

Click here to download the sequence:
Link to NCBI Protein BLAST