Transcript Information: S_Transcript_48677.p1


Annotated TAIR IDAT2G30570.1
Annotated Gene Namephotosystem II reaction center W
Annotated Gene Symbol(s)PSBW
Annotation TypeHomolog
Chromosome Positionchr2:13019326-13020053 | Reverse length=133
E-Value7E-23
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1742.36266603398
Replicate 2803.93708615716
Replicate 3827.98178312165
Condition 2: 8 Hour
Replicate 1626.29304194527
Replicate 2585.78919464547
Replicate 3585.62486577896
Condition 3: 24 Hour
Replicate 1902.15536380454
Replicate 2862.02006136002
Replicate 3716.61580551027


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_48677.p1 GENE.S_Transcript_48677~~S_Transcript_48677.p1 ORF type:complete len:114 (+),score=34.64,PsbW|PF07123.8|2.8e-47 S_Transcript_48677:980-1321(+)
ATGAAAGTGGTGAAATTGCATGTTTCAGGATTGCCAGCAATGACAAAGAAGGGCAAGGTAACATGCTCAATGGAGGAGAAGCCATCATCAAACCAAGAGAAGAGCTCAAACACAAGCATGGGAGCCTCATTGCTCGCGGCAGCTGCTGCAGCCACCATGTCGAGCCCAGCCATGGCTCTGGTTGATGTGAGAATGAGCACAGAAGGAACTGGTCTTCCTTTCGGGTTGAGCAACAACCTTCTTGGTTGGATCCTTTTGGGTGTCTTTGCTCTCATCTGGGCTTTCTACTTCACCTACGTTTCGGGTCTTGAGGAAGATGAAGAGTCTGGAATGTCCCTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_48677.p1 GENE.S_Transcript_48677~~S_Transcript_48677.p1 ORF type:complete len:114 (+),score=34.64,PsbW|PF07123.8|2.8e-47 S_Transcript_48677:980-1321(+)
MKVVKLHVSGLPAMTKKGKVTCSMEEKPSSNQEKSSNTSMGASLLAAAAAATMSSPAMALVDVRMSTEGTGLPFGLSNNLLGWILLGVFALIWAFYFTYVSGLEEDEESGMSL*

Click here to download the sequence:
Link to NCBI Protein BLAST