Transcript Information: S_Transcript_486904.p1


Annotated TAIR IDAT3G09510.1
Annotated Gene NameRibonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:2921804-2923258 | Forward length=484
E-Value1E-16
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.22667249545392
Replicate 30.31580027540412
Condition 2: 8 Hour
Replicate 10
Replicate 20.076615919999064
Replicate 30.1459989561985
Condition 3: 24 Hour
Replicate 10.44886746898481
Replicate 20.15523158613937
Replicate 30.086376864401083


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_486904.p1 GENE.S_Transcript_486904~~S_Transcript_486904.p1 ORF type:internal len:292 (+),score=37.37,RVT_3|PF13456.2|1.3e+04,RVT_3|PF13456.2|2.4e-22,zf-RVT|PF13966.2|4.5e-08,zf-RVT|PF13966.2|5.2e+03 S_Transcript_486904:2-874(+)
AAGAGCTTTGCTTGGAGGGCTGCATCGTGTGTCTTGCCTACCAGATATAATATAGCCAAGAGGGTGTGCAATGGCGAGATGAGGTGTTATTTCTGTGGAGCAAATGAAGACTCGGATGTGCATGCTATCAAGGACTGCCCTTGGTCGAGACAGCTCTGGGCTAGCAGCGGATGGGCGAGCTCTCTCTGGGATGGTTGGTACAGGTCTGTGCGTGACTGGTGGGAGGATCTCGAGGGCAAACTTGAGATGGACGACCTGGGCGCTTTTCTGGCTACTGCCTGGGCGATTTGGTGCGAGAGATGCAAGCTGATGTATGATGAGAGCCACGAACAGGGCCTGCAGGTATGCAAGAACGCTAGACAGTTTGTGCAGGCCTTTCGGACAGCAAGAGAGCGCACAGGAGAGAAGCAGCGACCCTCGACAACAAGCTGGACACCTCCTACTGCTGGCCACTGGAAGTTAAACACATACGCGGGGAAACTAGGTGAATGGGGTGCTGGATGGGGGATGGTGATTCGAGATTCGGTGGGCGAGACTGTTGCAATGGGTGTTCACCAATATGCAGGCAATTTTGATGTAGAATTGGAGGAAGCGCGGGCGATCTTGTTTGGTATGCGTACTGCTTGGGAGTTGGGATATCGCTCGCTTGTGGTCGAGTCCGATTGCTTGAGTGTGATATCAAAAATTAGAAAGAGACCTTCTATTTTATCTTCTCTTGGCTTTATTTTAGAGGAAATCCACATGTGGGCTTCCCAGTTTGAGTTTATTGCATGGTCACATGTTTGTAGGGAGGGCAATATAGTAGCCCATAGCTTAGCTAGTTTCCAGCCCTCTGAGGTTGTTGACCGATTTTGGTTGGAGGATGATATGCCA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_486904.p1 GENE.S_Transcript_486904~~S_Transcript_486904.p1 ORF type:internal len:292 (+),score=37.37,RVT_3|PF13456.2|1.3e+04,RVT_3|PF13456.2|2.4e-22,zf-RVT|PF13966.2|4.5e-08,zf-RVT|PF13966.2|5.2e+03 S_Transcript_486904:2-874(+)
KSFAWRAASCVLPTRYNIAKRVCNGEMRCYFCGANEDSDVHAIKDCPWSRQLWASSGWASSLWDGWYRSVRDWWEDLEGKLEMDDLGAFLATAWAIWCERCKLMYDESHEQGLQVCKNARQFVQAFRTARERTGEKQRPSTTSWTPPTAGHWKLNTYAGKLGEWGAGWGMVIRDSVGETVAMGVHQYAGNFDVELEEARAILFGMRTAWELGYRSLVVESDCLSVISKIRKRPSILSSLGFILEEIHMWASQFEFIAWSHVCREGNIVAHSLASFQPSEVVDRFWLEDDMP

Click here to download the sequence:
Link to NCBI Protein BLAST