Transcript Information: S_Transcript_486916.p1


Annotated TAIR IDAT4G25000.1
Annotated Gene Namealpha-amylase-like
Annotated Gene Symbol(s)ATAMY1, AMY1
Annotation TypeOrtholog
Chromosome Positionchr4:12852109-12853825 | Reverse length=423
E-Value8E-73
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.18610490374252
Replicate 20
Replicate 30.1289701824028
Condition 2: 8 Hour
Replicate 10.29825720723263
Replicate 20.1564464939841
Replicate 30.29812374272701
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.35275586580582


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_486916.p1 GENE.S_Transcript_486916~~S_Transcript_486916.p1 ORF type:internal len:143 (+),score=19.49,Alpha-amylase|PF00128.20|5.4e-13 S_Transcript_486916:3-428(+)
GGAAGATTATACGATCTCAACTCTTCTAAATATGGAAATGAAGCCCAACTAAAGTCATTGATCAATGCCTTTCACCAAAAGGGGATAAAATGTGTTGCAGACATAGTGATAAACCATAGGTGCGCAGATAAGAAAGATGAAAGAGGGATATATTGCATTTTCGAAGGAGGAACTCCCGATGACCGACTGGATTGGGGACCATGGGCCATTTGTAAAGATGACACCCAATATTCAGATGGTTCTGGAAACATGGATACTGGAGATGCTTACGCAGCTGCCCCCGACATTGATCATCTTAATTCAAGGGTACAAAAAGAGTTATCTGATTGGATGAATTGGCTTAAATCCGAAATCGGGTTTGATGGATGGAGATTTGATTTTGTCAAGGGATATGCTCCAAATATAACAAAGATTTATGTAGAACAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_486916.p1 GENE.S_Transcript_486916~~S_Transcript_486916.p1 ORF type:internal len:143 (+),score=19.49,Alpha-amylase|PF00128.20|5.4e-13 S_Transcript_486916:3-428(+)
GRLYDLNSSKYGNEAQLKSLINAFHQKGIKCVADIVINHRCADKKDERGIYCIFEGGTPDDRLDWGPWAICKDDTQYSDGSGNMDTGDAYAAAPDIDHLNSRVQKELSDWMNWLKSEIGFDGWRFDFVKGYAPNITKIYVEQ

Click here to download the sequence:
Link to NCBI Protein BLAST