Transcript Information: S_Transcript_486935.p1


Annotated TAIR IDAT4G23500.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:12264640-12267074 | Forward length=495
E-Value4.1E-85
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.15472675136733
Replicate 20.25654406462226
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.24785869308118
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.146639793053


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_486935.p1 GENE.S_Transcript_486935~~S_Transcript_486935.p1 ORF type:internal len:172 (+),score=34.88,Glyco_hydro_28|PF00295.13|4.8e-10 S_Transcript_486935:2-514(+)
TCAGGCGGTATCCAAGATGTAAGGGTTGAGGATATCACAGCCATTAACACAGAATCAGCTGTCAGGATCAAGACAGCCCCAGGAAGAGGTGCCTTTGTTAAGGACATCTTTGTTAAGGGCATGACCCTCAAGACAATGAAGTATGTGTTCTGGATGACGGGCAATTACGGGTCCCACCCTGATCCTGGTTACGATCCTAAGGCACTGCCTGTAATCAAGGGGATCAACTACAGGGACATAACAGCCGAGGATGTTCAGATGGCGGCTAATCTTGCTGGGATTGAGAACGATAAGTTTACTGGAATTTGCATCTCGAATGTGACTATTTCTATGGCTGAAAAGCATAAGAAAGTTCAGTGGAATTGCACTAATATTGAAGGGGTTACTAGTAGGGTTAGCCCTCAAGCTTGTGATTTATTGCCTGATAAGGATCCTGGCAAAGTTGTGGCTTGTCCTTTCCCCACTGACAAGCTTCCTATTGAAGATATTGGGTTGAAGACTTGCTCTTTGAGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_486935.p1 GENE.S_Transcript_486935~~S_Transcript_486935.p1 ORF type:internal len:172 (+),score=34.88,Glyco_hydro_28|PF00295.13|4.8e-10 S_Transcript_486935:2-514(+)
SGGIQDVRVEDITAINTESAVRIKTAPGRGAFVKDIFVKGMTLKTMKYVFWMTGNYGSHPDPGYDPKALPVIKGINYRDITAEDVQMAANLAGIENDKFTGICISNVTISMAEKHKKVQWNCTNIEGVTSRVSPQACDLLPDKDPGKVVACPFPTDKLPIEDIGLKTCSLR

Click here to download the sequence:
Link to NCBI Protein BLAST