Transcript Information: S_Transcript_48696.p1


Annotated TAIR IDAT3G08950.1
Annotated Gene Nameelectron transport SCO1/SenC family protein
Annotated Gene Symbol(s)HCC1
Annotation TypeOrtholog
Chromosome Positionchr3:2727285-2729289 | Forward length=334
E-Value9.1E-130
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.7349421232034
Replicate 26.3616632466454
Replicate 35.3178441468051
Condition 2: 8 Hour
Replicate 15.4294705408652
Replicate 26.2449025344022
Replicate 35.1654968122501
Condition 3: 24 Hour
Replicate 15.3607076050538
Replicate 25.144546186042
Replicate 37.11787756218


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_48696.p1 GENE.S_Transcript_48696~~S_Transcript_48696.p1 ORF type:5prime_partial len:326 (+),score=60.64,SCO1-SenC|PF02630.10|1.6e-50,AhpC-TSA|PF00578.17|8.7e-09,Thioredoxin_8|PF13905.2|5.3e-06 S_Transcript_48696:2-979(+)
TCGGTTCTCTCTCTCTCTCCCTTCGCAATTAGGTTTTCGTATTTGCTGAATCTTCTTAATGCGAAATCTCTTTCACTTCTCAGCTTGATTGATTTTCCCTCTCATTTTCAGGTGACTTTGAAAGGTAACGAAATCAAGTGGTTCGGATTACACGAGAGATTCCTGTGTACTACTGCTTCCACAATAAGAAGTGGTGCTGGAAACGGCGCTGCTTCTTCTTCATCGTCGACAGATTCTGGTCAGAGTTCCGCTACGAAAAGCTCATCGAGTGGTGATGGCGGCAACTCTCAAGGTTCACATCAATCTCAATCTAGCGACTCCGGAAAACCTGTTCGAGGATCGCCTGTTTCATGGATGAGCTTCTTTTTGTTGCTTGTTACTGGAGGAGGGATCATATACTACTATGACCGGGAAAAGAAACGACATATTGAAGAAATAAGCAATGCCTCAAATGCAGTGAGACAAGGACCATCTGTGGGACAAGCAGCTATTGGGGGGCCATTTAACTTAATCAACCATGATGGTAAAAAAGTGACTGATAAAGACTTCTTAGGTAAATGGACCGTGTTTTATTTTGGCTTCACACACTGTCCTGATATCTGCCCGGATGAGCTCCAAAAGCTTGCTGCTGCAGTTGATAAGATAAAAGAAAAATCTGGACTTGAAATTGTACCTGTCTTCATCTCCGTTGATCCTGAAAGAGACACTGTTGAGCAAGTCAGTGAGTATGTCAAAGAGTTCCATCCTAAGTTAATTGGATTAACTGGGGACCCTGAAGATATACAGAAGGTTGCTCGTGCATACAGAGTTTATTACATGAAGACAACGGAGGAAGGCTCAGATTACCTCGTCGACCATTCTATAGTCATGTACTTGATGAGCCCTGAGATGAAATTTGTCAAGTTCTTTGGAAAGAATAACGATGTTGAAGGACTTGCCGATGGCATAATCAAAGAGGTAAAGCATTACAAGAGATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_48696.p1 GENE.S_Transcript_48696~~S_Transcript_48696.p1 ORF type:5prime_partial len:326 (+),score=60.64,SCO1-SenC|PF02630.10|1.6e-50,AhpC-TSA|PF00578.17|8.7e-09,Thioredoxin_8|PF13905.2|5.3e-06 S_Transcript_48696:2-979(+)
SVLSLSPFAIRFSYLLNLLNAKSLSLLSLIDFPSHFQVTLKGNEIKWFGLHERFLCTTASTIRSGAGNGAASSSSSTDSGQSSATKSSSSGDGGNSQGSHQSQSSDSGKPVRGSPVSWMSFFLLLVTGGGIIYYYDREKKRHIEEISNASNAVRQGPSVGQAAIGGPFNLINHDGKKVTDKDFLGKWTVFYFGFTHCPDICPDELQKLAAAVDKIKEKSGLEIVPVFISVDPERDTVEQVSEYVKEFHPKLIGLTGDPEDIQKVARAYRVYYMKTTEEGSDYLVDHSIVMYLMSPEMKFVKFFGKNNDVEGLADGIIKEVKHYKR*

Click here to download the sequence:
Link to NCBI Protein BLAST