Transcript Information: S_Transcript_48697.p1


Annotated TAIR IDAT3G08950.1
Annotated Gene Nameelectron transport SCO1/SenC family protein
Annotated Gene Symbol(s)HCC1
Annotation TypeOrtholog
Chromosome Positionchr3:2727285-2729289 | Forward length=334
E-Value6.4E-133
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.7472329325398
Replicate 23.2333398489461
Replicate 33.2857748194921
Condition 2: 8 Hour
Replicate 16.2505454377804
Replicate 24.3072237323612
Replicate 34.4101753665479
Condition 3: 24 Hour
Replicate 12.69922410947
Replicate 22.6050358133733
Replicate 32.0293598946645


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_48697.p1 GENE.S_Transcript_48697~~S_Transcript_48697.p1 ORF type:5prime_partial len:348 (+),score=63.09,SCO1-SenC|PF02630.10|1.8e-50,AhpC-TSA|PF00578.17|1e-08,Thioredoxin_8|PF13905.2|6e-06 S_Transcript_48697:3-1046(+)
CCAAAAATGGCTGCCACAACCACCATCTCACGGACTACTTCACGCAGATTCCTTGATTCCACTCTTCGTCAATGGAGATCCTATTTCGTTTCTTCCTCTTCTCCTTCTTTTTCACCTGAGCTTCCTTCTCACCTCTCCAACTCTATCCTCTACCGCTCTCTTCCTCTTCGCTATTCGGTGACTTTGAAAGGTAACGAAATTAAGCGCTTCGGATTATACGAAAGATTCCTGTGTACTACTGCTTCCACAACAAGAAGTGGTGCTGGAAACGGTGCTGCTTCTTCTTCTTCGTCGACGGATTCTGGTCAGAGTTCCGGTACGAAAAGCTCATCGAGTGGTGATGGCGGCAACTCTCAAGGTTCACATCAATCTCAATCTAGCGACTCCGGAAAACCTGTTCGAGGATCGCCTGTTTCATGGATGAGCTTCTTTTTGTTGCTTGTTACTGGAGGAGGGATCATATACTACTATGACCGGGAAAAGAAACGACATATTGAAGAAATAAGCAATGCCTCAAATGCAGTGAGACAAGGACCATCTGTGGGACAAGCAGCTATTGGGGGGCCATTTAACTTAATCAACCATGATGGTAAAAAAGTGACTGATAAAGACTTCTTAGGTAAATGGACCGTGTTTTATTTTGGCTTCACACACTGTCCTGATATCTGCCCGGATGAGCTCCAAAAGCTTGCTGCTGCAGTTGATAAGATAAAAGAAAAATCTGGACTTGAAATTGTACCTGTCTTCATCTCCGTTGATCCTGAAAGAGACACTGTTGAGCAAGTCAGTGAGTATGTCAAAGAGTTCCATCCTAAGTTAATTGGATTAACTGGGGACCCTGAAGATATACAGAAGGTTGCTCGTGCATACAGAGTTTATTACATGAAGACAACGGAGGAAGGCTCAGATTACCTCGTCGACCATTCTATAGTCATGTACTTGATGAGCCCTGAGATGAAATTTGTCAAGTTCTTTGGAAAGAATAACGATGTTGAAGGACTTGCCGATGGCATAATCAAAGAGGTAAAGCAGTACAAGAGATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_48697.p1 GENE.S_Transcript_48697~~S_Transcript_48697.p1 ORF type:5prime_partial len:348 (+),score=63.09,SCO1-SenC|PF02630.10|1.8e-50,AhpC-TSA|PF00578.17|1e-08,Thioredoxin_8|PF13905.2|6e-06 S_Transcript_48697:3-1046(+)
PKMAATTTISRTTSRRFLDSTLRQWRSYFVSSSSPSFSPELPSHLSNSILYRSLPLRYSVTLKGNEIKRFGLYERFLCTTASTTRSGAGNGAASSSSSTDSGQSSGTKSSSSGDGGNSQGSHQSQSSDSGKPVRGSPVSWMSFFLLLVTGGGIIYYYDREKKRHIEEISNASNAVRQGPSVGQAAIGGPFNLINHDGKKVTDKDFLGKWTVFYFGFTHCPDICPDELQKLAAAVDKIKEKSGLEIVPVFISVDPERDTVEQVSEYVKEFHPKLIGLTGDPEDIQKVARAYRVYYMKTTEEGSDYLVDHSIVMYLMSPEMKFVKFFGKNNDVEGLADGIIKEVKQYKR*

Click here to download the sequence:
Link to NCBI Protein BLAST