Transcript Information: S_Transcript_486978.p1


Annotated TAIR IDAT1G68180.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:25554816-25555562 | Forward length=248
E-Value9E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.565470660893
Replicate 21.6686143362826
Replicate 31.2398478039395
Condition 2: 8 Hour
Replicate 10.53761488194453
Replicate 20.75199491225972
Replicate 30.35824953957952
Condition 3: 24 Hour
Replicate 11.2849931465055
Replicate 20.5713565943617
Replicate 30.84779981193668


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_486978.p1 GENE.S_Transcript_486978~~S_Transcript_486978.p1 ORF type:complete len:119 (+),score=4.04,zf-RING_2|PF13639.2|5.2e-11,zf-rbx1|PF12678.3|3e-07,zf-RING_11|PF17123.1|8.4e-07,zf-C3HC4|PF00097.21|3.7e-06,zf-C3HC4_2|PF13923.2|6.5e-06 S_Transcript_486978:242-598(+)
ATGGCAATCTATCACAATACCGGTCTTTTTGATCTGGAAGAAGCACTATCTATGCCATTATTGCCTCTAGTAAACATTCCAAGCCCCACGAATGTCACAACATCCAGCAATAATAATATTCCTTTAAGCTTTAGGGTCGATCAAATGCTCGAGACGCCTTTAATGATGTCGTTTCCAGTTGTTATGCCTCAAAACGATGTGTTATGTTCAGTCTGCATGGAAAACTTTAAGCCGCCGCGTAATGGTTTTGGTAGGCAAATCAGATGTGGCCATGTGTACCATGCCCATTGTATTGCCACGTGGCTCTCTGTGTGTAAAACTTGTCCTCTTTGCCGGCTGACAGTGGATGACCCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_486978.p1 GENE.S_Transcript_486978~~S_Transcript_486978.p1 ORF type:complete len:119 (+),score=4.04,zf-RING_2|PF13639.2|5.2e-11,zf-rbx1|PF12678.3|3e-07,zf-RING_11|PF17123.1|8.4e-07,zf-C3HC4|PF00097.21|3.7e-06,zf-C3HC4_2|PF13923.2|6.5e-06 S_Transcript_486978:242-598(+)
MAIYHNTGLFDLEEALSMPLLPLVNIPSPTNVTTSSNNNIPLSFRVDQMLETPLMMSFPVVMPQNDVLCSVCMENFKPPRNGFGRQIRCGHVYHAHCIATWLSVCKTCPLCRLTVDDP*

Click here to download the sequence:
Link to NCBI Protein BLAST