Transcript Information: S_Transcript_48699.p1


Annotated TAIR IDAT3G08950.1
Annotated Gene Nameelectron transport SCO1/SenC family protein
Annotated Gene Symbol(s)HCC1
Annotation TypeOrtholog
Chromosome Positionchr3:2727285-2729289 | Forward length=334
E-Value4.6E-106
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.9009286596557
Replicate 22.8141313211116
Replicate 31.5055294762123
Condition 2: 8 Hour
Replicate 15.4401505911054
Replicate 23.4242625468969
Replicate 33.588892709002
Condition 3: 24 Hour
Replicate 11.7832557951505
Replicate 21.7344753757409
Replicate 32.0589424004176


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_48699.p1 GENE.S_Transcript_48699~~S_Transcript_48699.p1 ORF type:complete len:196 (+),score=39.96,SCO1-SenC|PF02630.10|1.1e-50,AhpC-TSA|PF00578.17|2.2e-09,Thioredoxin_8|PF13905.2|1.8e-06 S_Transcript_48699:558-1145(+)
ATGACCGGGAAAAGAAACGACATATTGAAGGTACATCCCTATGAAATAAGCAATGCCTCAAATGCAGTGAGACAAGGACCATCTGTGGGACAAGCAGCTATTGGGGGGCCATTTAACTTAATCAACCATGATGGTAAAAAAGTGACTGATAAAGACTTCTTAGGTAAATGGACCGTGTTTTATTTTGGCTTCACACACTGTCCTGATATCTGCCCGGATGAGCTCCAAAAGCTTGCTGCTGCAGTTGATAAGATAAAAGAAAAATCTGGACTTGAAATTGTACCTGTCTTCATCTCCGTTGATCCTGAAAGAGACACTGTTGAGCAAGTCAGTGAGTATGTCAAAGAGTTCCATCCTAAGTTAATTGGATTAACTGGGGACCCTGAAGATATACAGAAGGTTGCTCGTGCATACAGAGTGTATTATATGAAGACAACAGAGGAAGGCTCAGATTACCTGGTCGACCATTCTATAGTCATGTACTTGATGAGCCCTGAGATGAAATTTGTCAAGTTCTTTGGAAAGAATAACGATGTTGAAGGACTTGCCGATGGCATAATCAAAGAGGTAAAGCAGTACAAGAGATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_48699.p1 GENE.S_Transcript_48699~~S_Transcript_48699.p1 ORF type:complete len:196 (+),score=39.96,SCO1-SenC|PF02630.10|1.1e-50,AhpC-TSA|PF00578.17|2.2e-09,Thioredoxin_8|PF13905.2|1.8e-06 S_Transcript_48699:558-1145(+)
MTGKRNDILKVHPYEISNASNAVRQGPSVGQAAIGGPFNLINHDGKKVTDKDFLGKWTVFYFGFTHCPDICPDELQKLAAAVDKIKEKSGLEIVPVFISVDPERDTVEQVSEYVKEFHPKLIGLTGDPEDIQKVARAYRVYYMKTTEEGSDYLVDHSIVMYLMSPEMKFVKFFGKNNDVEGLADGIIKEVKQYKR*

Click here to download the sequence:
Link to NCBI Protein BLAST