Transcript Information: S_Transcript_487082.p1


Annotated TAIR IDAT5G04080.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; Has 115 Blast hits to 115 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 5; Plants - 110; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:1104815-1105186 | Forward length=63
E-Value6.5E-19
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.53908069011389
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.60776010614738


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_487082.p1 GENE.S_Transcript_487082~~S_Transcript_487082.p1 ORF type:5prime_partial len:83 (+),score=5.37 S_Transcript_487082:2-250(+)
TGGAGAACAACAGCAACAACCAGCCGCCTCCAGGGTACCCGACGGCAGCGGGAGCAGCTGAGCAAGGCGGGAAGAAATCGCGGCGAGGAAGCACCAAATCTAGGGGAGACAAAGGCTTCATTGAAGGATGTATTGCTGCGCTGTGCTGCTGCTGGATCTGCGAGATGTGCTGCGACTAAGACAGCACACATACGATTATACGTACATACAGAGTTAATACACAGCCAGTGGTATGTACGTGATGCGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_487082.p1 GENE.S_Transcript_487082~~S_Transcript_487082.p1 ORF type:5prime_partial len:83 (+),score=5.37 S_Transcript_487082:2-250(+)
WRTTATTSRLQGTRRQREQLSKAGRNRGEEAPNLGETKASLKDVLLRCAAAGSARCAATKTAHIRLYVHTELIHSQWYVRDA*

Click here to download the sequence:
Link to NCBI Protein BLAST