Transcript Information: S_Transcript_487162.p1


Annotated TAIR IDAT1G09910.1
Annotated Gene NameRhamnogalacturonate lyase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:3220151-3224451 | Reverse length=675
E-Value5.1E-52
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.15116996789837
Condition 2: 8 Hour
Replicate 10.17479828128798
Replicate 20.18337580852235
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_487162.p1 GENE.S_Transcript_487162~~S_Transcript_487162.p1 ORF type:internal len:122 (+),score=22.58,CBM-like|PF14683.2|8.5e-31 S_Transcript_487162:1-363(+)
GAAAGATATGCTGAGATATATCCAAAGGATGACTTGGTTTATGACGTCAATGCTAGTGATTATAAGAAAGATTGGTTTTTTGCTCATGTCACAAGGCAAATTGGTGCAAGATATAATGGAACAACTTGGCAGGTCAAATTCAATCTTGATAATGTTGAACCAAATGCAAACTACAAGTTTAGACTAGCAATTGCTTCCGCTACCAATTCTGATTTAGAGATTCGATTCAACAAGCCCAAGCCAAGCCCACCAATATTTACAACAGGAAGAATAGGAAATGACAATTCAATTGCAAGACATGGTATTCATGGATTATATTGGCTATACAATATAGATGTGAAAGGAAATGAGCTCCAAAAGGGT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_487162.p1 GENE.S_Transcript_487162~~S_Transcript_487162.p1 ORF type:internal len:122 (+),score=22.58,CBM-like|PF14683.2|8.5e-31 S_Transcript_487162:1-363(+)
ERYAEIYPKDDLVYDVNASDYKKDWFFAHVTRQIGARYNGTTWQVKFNLDNVEPNANYKFRLAIASATNSDLEIRFNKPKPSPPIFTTGRIGNDNSIARHGIHGLYWLYNIDVKGNELQKG

Click here to download the sequence:
Link to NCBI Protein BLAST