Transcript Information: S_Transcript_487232.p1


Annotated TAIR IDAT4G09660.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Zinc finger, TTF-type (InterPro:IPR006580); BEST Arabidopsis thaliana protein match is: TTF-type zinc finger protein with HAT dimerisation domain (TAIR:AT1G19260.1); Has 839 Blast hits to 796 proteins in 42 species: Archae - 0; Bacteria - 0; Metazoa - 438; Fungi - 0; Plants - 401; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:6104446-6106607 | Forward length=664
E-Value9E-24
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.2571476855141
Replicate 30
Condition 3: 24 Hour
Replicate 10.25109061483442
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_487232.p1 GENE.S_Transcript_487232~~S_Transcript_487232.p1 ORF type:internal len:87 (+),score=11.87,DUF4371|PF14291.2|3.3e-41 S_Transcript_487232:2-259(+)
AAGGAGATAGGTAATGCAAAGTTTTCTATCATTGTTGATGAATCTCGTGACATATCTAAAAGAGAGCAAATGGCGATAGTAGTAAGATTTGTTGATATAGATGGAATTCTAAAGGAGCGATTTTTGGATCTAGTTCATGTTAAGGATACTTCTTCAATGACCCTTAAAGAGGCGATCACTTCTAGACTAGCCCATCACAATTTAAGTATTCAAAATTTGAGGGGGCAAGGCTATGATGGAGCTAGTAACATGCGAGGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_487232.p1 GENE.S_Transcript_487232~~S_Transcript_487232.p1 ORF type:internal len:87 (+),score=11.87,DUF4371|PF14291.2|3.3e-41 S_Transcript_487232:2-259(+)
KEIGNAKFSIIVDESRDISKREQMAIVVRFVDIDGILKERFLDLVHVKDTSSMTLKEAITSRLAHHNLSIQNLRGQGYDGASNMRG

Click here to download the sequence:
Link to NCBI Protein BLAST