Transcript Information: S_Transcript_48726.p1


Annotated TAIR IDAT4G29830.1
Annotated Gene NameTransducin/WD40 repeat-like superfamily protein
Annotated Gene Symbol(s)VIP3
Annotation TypeOrtholog
Chromosome Positionchr4:14597728-14599157 | Forward length=321
E-Value2E-186
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 121.800787313203
Replicate 218.194245635101
Replicate 317.533231290437
Condition 2: 8 Hour
Replicate 122.961310670228
Replicate 220.962115711744
Replicate 322.191841342172
Condition 3: 24 Hour
Replicate 115.85998390413
Replicate 219.310809315737
Replicate 319.002910168238


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_48726.p1 GENE.S_Transcript_48726~~S_Transcript_48726.p1 ORF type:5prime_partial len:365 (+),score=48.64,WD40|PF00400.28|0.18,WD40|PF00400.28|0.09,WD40|PF00400.28|0.71,WD40|PF00400.28|0.0035,WD40|PF00400.28|0.0013,WD40|PF00400.28|1.5e-08,WD40|PF00400.28|1.4,eIF2A|PF08662.7|4.7e+02,eIF2A|PF08662.7|1.6,eIF2A|PF08662.7|0.0017 S_Transcript_48726:2-1096(+)
TTCATTGGTAAATTTAGTCAATACAAACAAAGAGCACAAACACTCCAAACGAAGAAAAAAACACTTCACACTAGAGAGACAAGAAAAGAAACACCCCTCCCCAAGTTCAGAGTAATGAAGCTAGCAGGGTTGAAATCCTTAGAATCAGCACACGACGACTCAATATGGGCAGCAACTTGGGTCCCCACATCCGAGACCCGTCCCCGCCCACTTCTCCTCACCGGCTCACTCGACGAGACTGTACGGCTCTTCAACTGTGGAACCACCGATGACGACGTCGTTTTGGAGCGCACAAATACAGGGCATAGTCTTGGGGTTGTATCAGTGGCTGCTCATCCTTCTGGTGTAATTGCTGCATCTTCTTCACTTGATAGTTTTGTGAGAGTGTTTGATGTGGATACTAATCACACTATTGCCACTCTTGAGGCTCCTCCCTCTGAGTGCTGGCAATTGCAGTTCCACCCTAAGGGTACTATGCTAGCAGTTGCTGGAGGTAGCAGCACATCAGTCAAACTATGGGACACAGCAACATGGCAACTTGTTACCACACTACAAATCCCTCGTCCTGAAAGCAGCAAGCCAAGCGAGAAAATTCCGGCAAAGAAGTTTGTACTCTCAGTCGCGTGGAGTCCTGATGGGAGACGAGTGACTTGTGGCTCAATGGACGGGACAATTTCCGTCTTCGATGTGGCCCGTGCCAAGTTCCTTCACCATCTTGAGGGTCACCTGATGCCAGTCAGATCTCTTGTGTATTCTCCTGTCGATCCTAGAGTTCTGTTTTCAGGATCTGACGATGCGCACGTACATATGTATGATGCAGAGGGCAAGAGCTTGATAGGGTCGATGTCTGGTCACTCCAGCTGGGTTTTAAGTGTTGATGCAAGCCCAGATGGTTCAGCTATTGCAAGCGGTTCAAGTGACAGGACCGTGAAGCTTTGGGACCTCAGCATGCGGGCAGCCGTCCAGAGCATGACCAACCATGCAGACATGGTATGGGCAGTAGCGTTTCGGCCACCTGGTGGGACCGCTGTGAGAGCTGGTCGGCTTGCTAGCGTATCAGATGACAAGAGCATATCATTATATGATTATTCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_48726.p1 GENE.S_Transcript_48726~~S_Transcript_48726.p1 ORF type:5prime_partial len:365 (+),score=48.64,WD40|PF00400.28|0.18,WD40|PF00400.28|0.09,WD40|PF00400.28|0.71,WD40|PF00400.28|0.0035,WD40|PF00400.28|0.0013,WD40|PF00400.28|1.5e-08,WD40|PF00400.28|1.4,eIF2A|PF08662.7|4.7e+02,eIF2A|PF08662.7|1.6,eIF2A|PF08662.7|0.0017 S_Transcript_48726:2-1096(+)
FIGKFSQYKQRAQTLQTKKKTLHTRETRKETPLPKFRVMKLAGLKSLESAHDDSIWAATWVPTSETRPRPLLLTGSLDETVRLFNCGTTDDDVVLERTNTGHSLGVVSVAAHPSGVIAASSSLDSFVRVFDVDTNHTIATLEAPPSECWQLQFHPKGTMLAVAGGSSTSVKLWDTATWQLVTTLQIPRPESSKPSEKIPAKKFVLSVAWSPDGRRVTCGSMDGTISVFDVARAKFLHHLEGHLMPVRSLVYSPVDPRVLFSGSDDAHVHMYDAEGKSLIGSMSGHSSWVLSVDASPDGSAIASGSSDRTVKLWDLSMRAAVQSMTNHADMVWAVAFRPPGGTAVRAGRLASVSDDKSISLYDYS*

Click here to download the sequence:
Link to NCBI Protein BLAST