Transcript Information: S_Transcript_487336.p1


Annotated TAIR IDAT4G20520.1
Annotated Gene NameRNA binding;RNA-directed DNA polymerases
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:11045912-11047716 | Forward length=376
E-Value1E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.1215205535853
Replicate 20.10074333131285
Replicate 30.16842681354886
Condition 2: 8 Hour
Replicate 10.29212863448127
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.20697544818582
Replicate 30.11516915253478


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_487336.p1 GENE.S_Transcript_487336~~S_Transcript_487336.p1 ORF type:5prime_partial len:219 (+),score=23.85,RVT_1|PF00078.23|3.5e-18 S_Transcript_487336:3-659(+)
CACCTCTTGAATGAAGATTTCTCCTACTTAGCGCGCCCTTTTACCAGTGACGAAGTGAATCTAGCAATAGATGAGATGAACCCCTTTAAGGCACTTGGTCTGGATGGATTTCTTACAGTTTTTTATCAAAAGAATTGGGATATAGTTAAAGAGGAAGTACTCATGATGACACTAGACATTCTTAATGGGGCTTCCTCCTCTTCTTCTTTGAATGAAGCTTTGGTAGTGCTTATAACCAAGAAGGATAACCCTCAAGGGGTAAATCATCTCCGACCAATCTACCTCTGCAAAGTGACTATGAAGTTGGTGGCCAAAACCATTGTCCAGCGGCTCAAGAACATCCTGCCCAAGATAATTGAACCCACCCAAGCAACTTTTGTCCCTGGGCGTAACATCACGAACAATGTGGTCATATTTCACGAAATCCTCCGCAAAATGAGCTATACAAAGTCGAAGATGGGAATGATGGCCATTAAGGTAGATCTCAAAAAGGCTTACGATCGGGCCTGGAGGTCTTTCTTGAGGGATACTCTTCTTGACTTGAACCTCCCTATCAACTTAATTGAAGTCAACATGGGTTGCGTGTCATCTACCTCTACGAAGGCTTTTTGGAATGGCTCTATCACTGAGTCTTTCCAACCCTCTAGAGAATTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_487336.p1 GENE.S_Transcript_487336~~S_Transcript_487336.p1 ORF type:5prime_partial len:219 (+),score=23.85,RVT_1|PF00078.23|3.5e-18 S_Transcript_487336:3-659(+)
HLLNEDFSYLARPFTSDEVNLAIDEMNPFKALGLDGFLTVFYQKNWDIVKEEVLMMTLDILNGASSSSSLNEALVVLITKKDNPQGVNHLRPIYLCKVTMKLVAKTIVQRLKNILPKIIEPTQATFVPGRNITNNVVIFHEILRKMSYTKSKMGMMAIKVDLKKAYDRAWRSFLRDTLLDLNLPINLIEVNMGCVSSTSTKAFWNGSITESFQPSREL*

Click here to download the sequence:
Link to NCBI Protein BLAST