Transcript Information: S_Transcript_48760.p1


Annotated TAIR IDAT5G12900.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G12330.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:4072151-4074445 | Reverse length=562
E-Value3E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.30650061759
Replicate 218.973999019463
Replicate 318.996018166109
Condition 2: 8 Hour
Replicate 119.832612994934
Replicate 221.25325620774
Replicate 321.529006081031
Condition 3: 24 Hour
Replicate 116.383662617946
Replicate 219.944154187186
Replicate 316.646549307377


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_48760.p1 GENE.S_Transcript_48760~~S_Transcript_48760.p1 ORF type:internal len:100 (-),score=21.74 S_Transcript_48760:3-299(-)
GACTCTGTTTGTAGTTGTACATGCTCTGTTTCTTTGTTAATGGCTACAGCAGTAGGTGTGAATGGAGAAGAAGGGAATATTAGCAGGCAAGAAATACAAGCAGCCATTGCTAAAGCTGTGGAACTCAGAGCTCTTCATGCGGCTTTAATGCAAGGCAATAGCCCTGCTCATCTTAGATTTCTTTCAGCTTCTTCTCCTACTTTATCTAGACCTACTTCTCACTTCTCTGCTCATGATTACCCTGTTTTTACTCCTAGTTATGAAGATGAGCCCTTGCCAGGGTATAGCCACATCCCC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_48760.p1 GENE.S_Transcript_48760~~S_Transcript_48760.p1 ORF type:internal len:100 (-),score=21.74 S_Transcript_48760:3-299(-)
DSVCSCTCSVSLLMATAVGVNGEEGNISRQEIQAAIAKAVELRALHAALMQGNSPAHLRFLSASSPTLSRPTSHFSAHDYPVFTPSYEDEPLPGYSHIP

Click here to download the sequence:
Link to NCBI Protein BLAST