Transcript Information: S_Transcript_48761.p1


Annotated TAIR IDAT5G12900.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G12330.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:4072151-4074445 | Reverse length=562
E-Value2.4E-182
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 121.460652511198
Replicate 221.691362123887
Replicate 323.037895915878
Condition 2: 8 Hour
Replicate 120.535561046128
Replicate 222.673152998511
Replicate 324.22255409657
Condition 3: 24 Hour
Replicate 116.880137242732
Replicate 220.29822854986
Replicate 319.786991065293


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_48761.p1 GENE.S_Transcript_48761~~S_Transcript_48761.p1 ORF type:complete len:594 (+),score=98.16 S_Transcript_48761:415-2196(+)
ATGGCTACAGCAGTAGGTGTGAATGGAGAAGAAGGGAATATTAGCAGGCAAGAAATACAAGCAGCCATTGCTAAAGCTGTGGAACTCAGAGCTCTTCATGCGGCTTTAATGCAAGGCAATAGCCCTGCTCATCTTAGATTTCTTTCAGCTTCTTCTCCTACTTTATCTAGACCTACTTCTCACTTCTCTGCTCATGATTACCCTGTTTTTACTCCTAGTTATGAAGATGAGCCCTTGCCAGGGTATAGCCACATCCCCACAGTCAGCCAAGCGATATCGGAAGGTTGGGATGAGAACAGATTAGGAGAGAATCAAATCGAACTCGATGAAAATACAACTGTAAAGTTAGAGTACACAAGAGCAAATGCACCATCAAGGAAAGGGCTTCCACCTGGATTACTGAATTCAGATCAGCATATTTGCCCTGCTGATGACACCAAATCGGTAGCTAGTTCGTGCACGAACCACCTTGCGTTTCTGCAAACTTCTCCAGGAACTGAAAAGCAAAAGTCGAGGAGGAGAAACAGTTTAGGGGACTTGAAATCAGTGTCTTCCTGTAACAAGTGTAAGCCTGCAATTATTAGCACTGATAATGATGATATCAGAAGTAGCAAGCACTACTCTAACATGGTCGTGCCACTAACAGATTCTCATGCCACCATCACTGCCTCACAGAACAAACCTCGAGGCATGATCCTCTCGTGGCTATTGCCTCGGTTCAAGAGAAGGCAAAAGAACGAGAACACCACTTCACCGATTAGAACAGAATCCGAGGAAGTGTCACAAGCTCTCAAGGACTTGGGGATTGTGTCGATTGAGACACTCAAAAGAGAGCTGATTGAAGCGAATCAGAAGAGGGATTCGGCTCTAAAGGAAGTCTCTGATATGAAGTCTTTGTTTGGAGAGCTGAAAAAGAAGCTTGAGAATTTGGAGTCGTACTGTGAAGAGCTTAAGATGGCTCTGAGACAAGCCGTGCAGACTAATGGTAGCTCTCGAGGGGATGACAAGCTCGGGAGTCTCTCTAAGAGGGGGAAACTCAATGATGGAACTAATGCAGATAGTTTGCCTGTTAGTGAAGATGTGATGATTGAAGGTTTTTTACAGATTGTTTCGGAAGCAAGATTGTCAGTCAAGCAGTTCTGCAAGACGCTTTCTGCTCAAATCGAAGAAACAGATGGACAACTCATGGAAAACTTAAACCAGCTCCTAAAACCCTACAAGCTCTCTGTAAATTCAAGGTACTCAAAGGCGGTTTTCTACCACTTGGAAGCGATCATAAATCAAGCATTCTACCAGGATTTCGAGAACTGTGTGTTTCAGAAAAACGGAACGCCAAAATTACTAGACCCCCATCAAGATCGACAACAACAGTTTCAATCTTTTGTGGCGCTTAGGAACCTGAGTTGGAACGAGGTACTGAAAAAAGGAACAAAGTATTACAGTGAAGAGTTCAGCAAGTTTTGTGATCAGAAAATGAGCTGCATAATCATGACCCTGAATTGGACTAGACAGTGGCCTGAAAACCTGCTTCAGTCGTTCTTCGTAGCAGCAAAGTGCATCTGGTTACTTCATTTGCTCGCATTCTCTTTCTATCCACCTGTGGCGATCCTAAGAGTGGAAGAGAATCGAACCTTTGATCCTCATTACATGGAAGATATGTTCACCGACAAGCAAAAGGCGCAGGGACCAAGCCGGGTTAAGATTATGGTCATGCCGGGTTTTTATGTCCAAGATAAGATTTTAAGATGTAAGGTTCTGTGCAGATACAAATCTGTAACATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_48761.p1 GENE.S_Transcript_48761~~S_Transcript_48761.p1 ORF type:complete len:594 (+),score=98.16 S_Transcript_48761:415-2196(+)
MATAVGVNGEEGNISRQEIQAAIAKAVELRALHAALMQGNSPAHLRFLSASSPTLSRPTSHFSAHDYPVFTPSYEDEPLPGYSHIPTVSQAISEGWDENRLGENQIELDENTTVKLEYTRANAPSRKGLPPGLLNSDQHICPADDTKSVASSCTNHLAFLQTSPGTEKQKSRRRNSLGDLKSVSSCNKCKPAIISTDNDDIRSSKHYSNMVVPLTDSHATITASQNKPRGMILSWLLPRFKRRQKNENTTSPIRTESEEVSQALKDLGIVSIETLKRELIEANQKRDSALKEVSDMKSLFGELKKKLENLESYCEELKMALRQAVQTNGSSRGDDKLGSLSKRGKLNDGTNADSLPVSEDVMIEGFLQIVSEARLSVKQFCKTLSAQIEETDGQLMENLNQLLKPYKLSVNSRYSKAVFYHLEAIINQAFYQDFENCVFQKNGTPKLLDPHQDRQQQFQSFVALRNLSWNEVLKKGTKYYSEEFSKFCDQKMSCIIMTLNWTRQWPENLLQSFFVAAKCIWLLHLLAFSFYPPVAILRVEENRTFDPHYMEDMFTDKQKAQGPSRVKIMVMPGFYVQDKILRCKVLCRYKSVT*

Click here to download the sequence:
Link to NCBI Protein BLAST