Transcript Information: S_Transcript_487916.p1


Annotated TAIR IDAT5G44470.1
Annotated Gene NameBEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein (TAIR:AT3G23320.1); Has 74 Blast hits to 74 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:17918739-17919164 | Forward length=108
E-Value2E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.14809298831342
Replicate 20.62144023999241
Replicate 30.14802671947904
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_487916.p1 GENE.S_Transcript_487916~~S_Transcript_487916.p1 ORF type:3prime_partial len:144 (+),score=23.64,RVT_3|PF13456.2|1.5e-07 S_Transcript_487916:85-513(+)
ATGGGTGTTACAGCTCGCTATCGGGACGCAACAGTGGGGACTGAAGCAGGGGTGCGACGAGGTCAGGAGCTGCAACAGCAGGGACAGAGGCAGGGTTGGATGCCTCCATGTGCTGGAATCTGGAAGCTTAATGCGGACGCGGGGAAGCTGGATGGTTGGGGTGTAGGCTGGGGGTTTGTGGTCCGAGACAATGAAGGGGAGGTGATGGAAATGGGGGTTCACCAAGTCCGCGGTTCTATGCATGTTGAGATCGAGGAGGCTGGAGCACTCTTGTTCTGGATGCAAGCTGCTTGGGAGGCCGGGTACCGTTCACTAATTACTGAGAGTGATTGCTTGGGATTGATCCAGAAACTCAAGAACTACGCTCCCATACAATCCACTTTGGGATATATTATAGAGGAGAATTTATCTTATGCTTTGAAGTTTGAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_487916.p1 GENE.S_Transcript_487916~~S_Transcript_487916.p1 ORF type:3prime_partial len:144 (+),score=23.64,RVT_3|PF13456.2|1.5e-07 S_Transcript_487916:85-513(+)
MGVTARYRDATVGTEAGVRRGQELQQQGQRQGWMPPCAGIWKLNADAGKLDGWGVGWGFVVRDNEGEVMEMGVHQVRGSMHVEIEEAGALLFWMQAAWEAGYRSLITESDCLGLIQKLKNYAPIQSTLGYIIEENLSYALKFD

Click here to download the sequence:
Link to NCBI Protein BLAST