Transcript Information: S_Transcript_488037.p1


Annotated TAIR IDAT5G64040.2
Annotated Gene Namephotosystem I reaction center subunit PSI-N, chloroplast, putative / PSI-N, putative (PSAN)
Annotated Gene Symbol(s)PSAN
Annotation TypeOrtholog
Chromosome Positionchr5:25628690-25629409 | Reverse length=181
E-Value1.5E-38
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.13789243473447
Replicate 30
Condition 2: 8 Hour
Replicate 10.26656737896416
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.14164882235217
Replicate 30.31527555506395


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_488037.p1 GENE.S_Transcript_488037~~S_Transcript_488037.p1 ORF type:complete len:160 (+),score=0.74,PsaN|PF05479.7|2.8e-67 S_Transcript_488037:30-482(+)
ATGGCCGGAGTGAGCACCAGCGTCGTCGGCCTCAAGCCCGCCGCGGCGGCCTCCTCTTCTCCGGCGCTGCCGAAGCGCGTGCACGTCGCGGCGCCGCCCAAGCTGGAGCAGCAGAGCGGCGGCAGGCGCGCCGCGCTGCTGGGTCTCGCCGCCGTGTTCGCCGCCACCGCCGCCGGGCAGGGGCAGGCCAGGGCCGGCGTGTTCGACGAGTACCTCGAGAAGAGCAAGGCCAACAAGGAGCTGAACGACAAGAAGAGGCTGGCGACGAGCGGCGCCAACTTCGCGAGGGCGTACACCGTCGAGTTCGGCAGCTGCCAGTTCCCCTACAACTTCACCGGCTGCCAGGACCTCGCCAAGCAGAAGAAAGTCCCGTTCATCTCAGATGATCTCGAGATCGAGTGCGAGGGGAAGGAGAAGTACAAGTGCGGATCCAACGTCTTCTGGAAATGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_488037.p1 GENE.S_Transcript_488037~~S_Transcript_488037.p1 ORF type:complete len:160 (+),score=0.74,PsaN|PF05479.7|2.8e-67 S_Transcript_488037:30-482(+)
MAGVSTSVVGLKPAAAASSSPALPKRVHVAAPPKLEQQSGGRRAALLGLAAVFAATAAGQGQARAGVFDEYLEKSKANKELNDKKRLATSGANFARAYTVEFGSCQFPYNFTGCQDLAKQKKVPFISDDLEIECEGKEKYKCGSNVFWKW*

Click here to download the sequence:
Link to NCBI Protein BLAST