Transcript Information: S_Transcript_48813.p1


Annotated TAIR IDAT2G47330.1
Annotated Gene NameP-loop containing nucleoside triphosphate hydrolases superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:19429083-19431617 | Reverse length=760
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 120.298051789544
Replicate 219.418460058491
Replicate 320.318268566679
Condition 2: 8 Hour
Replicate 121.661019946822
Replicate 220.475929263479
Replicate 321.109398717766
Condition 3: 24 Hour
Replicate 119.834942636738
Replicate 218.026784752615
Replicate 318.626449258016


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_48813.p1 GENE.S_Transcript_48813~~S_Transcript_48813.p1 ORF type:5prime_partial len:826 (+),score=174.42,DEAD|PF00270.25|5.1e-49,Helicase_C|PF00271.27|1.1e+04,Helicase_C|PF00271.27|98,Helicase_C|PF00271.27|3.5e-26 S_Transcript_48813:1-2478(+)
CGGACCATCAAAACAAACCAACCGACCCGCCATCGAATCACCTCCTCACTCACCGCCAATACCACCCCCTATCTTTCTTTCCACCCCCAAATTACAAAAATTAGGGTTTGTTCTTACAATACAGACAACAATCAAGCTCCAAAGCTCCTCAAAATGTCGAAACGCAAATTCGGATTCGAAGGTTTCGGAATAAACCGGCAACAAACCTACAACTTCGAGCGATCTCAACAACCTCGTCAAAATCTCTACGTTCCACCACGATCTTCTCGTTCTCACGACCACTACGAAGACACCGATCTCGACAACATCGACTACGCCGAAACCGACACCACCACAACCACCGACGACAACAACAACAACGTTGCCGATGACGAAGTGGACCCACTGGACGCGTTCATGGAAGGAATACACGAGGAAATGAAGGCAGCACCAGCGCCAAAACCGAAGGAGAAGCTAGACAAGTATAGAGATGACGATGATGACGAGGACGATCCAATTGAGAGCTTCTTGAGAGCCAAGAAGGACGTAGGGCTGACGTTAGCATCGGATGCTCTTCACGCTGGCTATGATTCCGACGAGGAGGTTTATGCTGCTGCTAAAGCTGTTGATGCTGGTTTGATTGAGTATGATTCCGATGATAATCCGGTTGTTCTTGATAAGAAGAAGATTGAGCCAATTCCTGCTTTGGATCATAGTGAGATTGATTATGAGCCTTTTAACAAGGATTTTTATGAGGAGAAGCCTTCCATTTCAGGCATGAGTGAACAGGATGTCACGGAGTACCGGAAAAGCTTGAAAATCCGCATCTCTGGTTTTGATGTTCCAAGACCCGTTAAGACTTTTGATGATTGTGGCTTTCCTCCAGAACTAATGAGCGCAATTAGGAAGCAAGGCTATGAGAAGCCTACCAACATACAGTGCCAGGCATTGCCTATAGTGCTGTCTGGGTTGGATATTATTGGTATTGCAAAGACTGGCTCTGGAAAAACTGCTGCGTTTGTGCTTCCTATGATTGTGCACATAATGGACCAGCCAGAGCTTGACAAAGGAGAGGGTCCAATTGGAGTTATATGTGCTCCTACTAGGGAATTAGCTCATCAAATATATCTGGAAGCTAAGAAATTTGCAAAACCCTATGGTGTTCGTGTAACTGCTGTCTATGGTGGAATGTCTAAACTTGATCAGTTTAAGGAACTCAAGGCGGGGTCTGAAATTGTAGTTGCTACCCCTGGGAGATTAATTGATTTGTTGAAAATGAAAGCATTAACAATGAGAAGAGCAACTTACCTGGTGCTTGATGAAGCAGATCGTATGTTTGACCTTGGTTTTGAGCCACAGATAAGGTCAATTGTTGGTCAGATCAGGCCAGACCGTCAGACTTTACTCTTTTCAGCAACTATGCCTCGGAAAGTTGAAAAATTGGCTAGAGAGATTCTTTCTGATCCTGTGCGTGTTACGGTGGGGGAGGTAGGCATGGCAAATGAGGATATCACTCAGGTTGTTCAAGTACTTCCCTCTGATGCAGAGAAGCTACCTTGGCTCCTAGAAAAGCTACCGGGAATGATTGATGAGGGTGATGTCTTGGTGTTTGCTTCTAAGAAGGCCTCAGTGGATGAAATTGAGTCTCAGCTTGCACAGAGAGGGTTCAAAGTTGCTGCTCTTCACGGTGACAAGGACCAGGCTTCTCGGATGGAGATATTGCAGAAGTTTAAGGCTGGGACCTTTCATGTTCTTATTGCAACTGATGTTGCTGCGCGAGGTCTTGATATCAAGTCAATCAAGTCAGTTGTCAACTTTGATATTGCAAAAGATATGGATATGCATGTACATCGTATTGGTAGAACAGGTCGTGCTGGTGATAAGGATGGTACAGCATACACGCTTATCACACAAAAGGAGGCCCGTTTTGCTGGGGAATTGGTGAATAGTCTGATTGCTGCTGGTCAGAACGTGTCCATGGAGTTGATGGATCTAGCTATGAAGGATGGAAGATTCAGGTCTAAACGTGATGCAAGGAAAGGAGGTGGTAAGAAGGGTAAAGGTAGAGGAGGAGTAGGTGGTAGAGGAGGCGCTGGTCGTGGTGTACGTGGTGTGGATTTCGGTTTGGGTATCGGATATAATCCAGAATCAAACAACGCATCCTCTCAGACAGCTGGTCGGAGTGCTGCAGTGAATTCTCTTCGGACAGGTATGATGGCACAATTCAGGAGCAGCTTTGTACCTGCTTCAGCCAGCAGTCAAAATCAGGTGGCTAGCAATTTCAATACATCTGCCAATATGAGACCAGCATTATCTGGCTTTGTTGCGGGTGGTACCATTGGGGGAGATGCGAATAGACCTCAACCCACCCCTACGACAACAAATTATCCTGCAGTCTCAGAAGGGAGTGCAGCTGGTCAACAAAATGCCAGTCAGAAGAGCAGTGAAAGCTCGAGAGATAGAAGAGAAAGGCGGAGGCCGTCCGGGTGGGACAGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_48813.p1 GENE.S_Transcript_48813~~S_Transcript_48813.p1 ORF type:5prime_partial len:826 (+),score=174.42,DEAD|PF00270.25|5.1e-49,Helicase_C|PF00271.27|1.1e+04,Helicase_C|PF00271.27|98,Helicase_C|PF00271.27|3.5e-26 S_Transcript_48813:1-2478(+)
RTIKTNQPTRHRITSSLTANTTPYLSFHPQITKIRVCSYNTDNNQAPKLLKMSKRKFGFEGFGINRQQTYNFERSQQPRQNLYVPPRSSRSHDHYEDTDLDNIDYAETDTTTTTDDNNNNVADDEVDPLDAFMEGIHEEMKAAPAPKPKEKLDKYRDDDDDEDDPIESFLRAKKDVGLTLASDALHAGYDSDEEVYAAAKAVDAGLIEYDSDDNPVVLDKKKIEPIPALDHSEIDYEPFNKDFYEEKPSISGMSEQDVTEYRKSLKIRISGFDVPRPVKTFDDCGFPPELMSAIRKQGYEKPTNIQCQALPIVLSGLDIIGIAKTGSGKTAAFVLPMIVHIMDQPELDKGEGPIGVICAPTRELAHQIYLEAKKFAKPYGVRVTAVYGGMSKLDQFKELKAGSEIVVATPGRLIDLLKMKALTMRRATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMPRKVEKLAREILSDPVRVTVGEVGMANEDITQVVQVLPSDAEKLPWLLEKLPGMIDEGDVLVFASKKASVDEIESQLAQRGFKVAALHGDKDQASRMEILQKFKAGTFHVLIATDVAARGLDIKSIKSVVNFDIAKDMDMHVHRIGRTGRAGDKDGTAYTLITQKEARFAGELVNSLIAAGQNVSMELMDLAMKDGRFRSKRDARKGGGKKGKGRGGVGGRGGAGRGVRGVDFGLGIGYNPESNNASSQTAGRSAAVNSLRTGMMAQFRSSFVPASASSQNQVASNFNTSANMRPALSGFVAGGTIGGDANRPQPTPTTTNYPAVSEGSAAGQQNASQKSSESSRDRRERRRPSGWDR*

Click here to download the sequence:
Link to NCBI Protein BLAST