Transcript Information: S_Transcript_4883.p1


Annotated TAIR IDAT4G23820.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:12397217-12400050 | Reverse length=444
E-Value1E-238
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.1583777725865
Replicate 28.0880942195662
Replicate 37.6011276700306
Condition 2: 8 Hour
Replicate 115.72805359615
Replicate 218.489532172963
Replicate 315.489824181494
Condition 3: 24 Hour
Replicate 16.2075482370235
Replicate 26.3910965399678
Replicate 38.1520273673803


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_4883.p1 GENE.S_Transcript_4883~~S_Transcript_4883.p1 ORF type:complete len:461 (+),score=54.28,Glyco_hydro_28|PF00295.13|3.5e-40,Pectate_lyase_3|PF12708.3|1.1e-12 S_Transcript_4883:78-1460(+)
ATGGAGTACTGTATAAATTATACATACAATTTCCCCACAAAAATGTATTATCGGCTGCCAATTTTGGTGATATGCTCCTTGTCAATGTCAGCCTCGATTGGAAATGCCATCAATGATGTGGCTGTGACATGCTCGGATATTGTGCCGGCACGGTATCGGCACGATCAAATATCGATTGCGGACTTCGGTGGCGTTGGTGACGGAGTGACAGTGAACACCAAGGCCTTTGAAGCGGCAATTTATCGGATTGAGCATTTGGAAAGGAGAGGGGGTACTCTGCTTTATATACCTTCAGGGGTGTACTTAACTGAAAGATTTAACTTGACTAGCCATATGACTCTTTACTTGGCCAGAGATGCCGTTATCAAAGCCACTCAGGATACATCTAATTGGCCATTAGCTAATGCACTGCCATCTTATGGAAGAGGGAGAGAGCTTCCTGGAGGAAGGTTTATGAGTTTCATGTTAGGAGATGGAGTCCATGATGTCATTATTACTGGTGAGAATGGAACAATTGATGGTCAAGGTGATGTTTGGTGGAACATGTGGAGAAAAAAGACTCTTCCATATACTAGACCTCATCTCATAGAATTCATGCATTCCAGACACATCATTATTTCTTATGTGATATTGAAGAACTCTCCATTTTGGAACATTCACCCTGTTTATTGCAGCAATTTTGTTGTACGATATACGACGATATTGGCACCATCTAACTCTCCCAATACGGATGGAGTTGACCCAGATCCGAGCACCAATATATGCATCGAAGACTCCTACATTTCTACTGGTGATGATCTCGTGGCAATTAAGAGTGGGTGGGATGAGTATGGAATTTCCTATGGCCGTCCTAGCTCTAACATCACTATTCGAAGAGTAACTGGATCATCTCCATATGCGGGGATTGCTGTTGGAAGTGAGACATCTGGTGGGGTGGAGCATGTTTTGGCCGAGCATATCAGCCTTTACAACTTGGGAGTTGGAATACATATAAAGACAAACGTAGGGAGGGGTGGGTATATAAGAAACATAACAGTCTCTGATGTATACATTGAAAAAGCTCGTAAAGGCATCAAGATTGCAGGAGATGTTGGAGATCATCCTGATGACAGATTCGAACCAAGTGCTATTCCAGTTGTCCAGGATATAACACTGAAGAACATTTGGGGCCTGAGGGTTCAACAGCCTGGACTGATCAAGGGTATAAAGAATGCTCCATTCACTCATATCTGTCTTTCAGATATCAACCTTGATGGCTCGGAAATGAAAACTACTCCTTGGGAGTGCTCTGACGTGATGGGTTCCTCCTCAAAGGTAAGCCCATCGCCTTGCTCCGAATTGGTTAGCACCCAAGGCATTGGCTTCTGTTCGAATCAAAGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_4883.p1 GENE.S_Transcript_4883~~S_Transcript_4883.p1 ORF type:complete len:461 (+),score=54.28,Glyco_hydro_28|PF00295.13|3.5e-40,Pectate_lyase_3|PF12708.3|1.1e-12 S_Transcript_4883:78-1460(+)
MEYCINYTYNFPTKMYYRLPILVICSLSMSASIGNAINDVAVTCSDIVPARYRHDQISIADFGGVGDGVTVNTKAFEAAIYRIEHLERRGGTLLYIPSGVYLTERFNLTSHMTLYLARDAVIKATQDTSNWPLANALPSYGRGRELPGGRFMSFMLGDGVHDVIITGENGTIDGQGDVWWNMWRKKTLPYTRPHLIEFMHSRHIIISYVILKNSPFWNIHPVYCSNFVVRYTTILAPSNSPNTDGVDPDPSTNICIEDSYISTGDDLVAIKSGWDEYGISYGRPSSNITIRRVTGSSPYAGIAVGSETSGGVEHVLAEHISLYNLGVGIHIKTNVGRGGYIRNITVSDVYIEKARKGIKIAGDVGDHPDDRFEPSAIPVVQDITLKNIWGLRVQQPGLIKGIKNAPFTHICLSDINLDGSEMKTTPWECSDVMGSSSKVSPSPCSELVSTQGIGFCSNQS*

Click here to download the sequence:
Link to NCBI Protein BLAST