Transcript Information: S_Transcript_48853.p1


Annotated TAIR IDAT2G41950.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 53 Blast hits to 53 proteins in 24 species: Archae - 0; Bacteria - 27; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:17513137-17514029 | Forward length=266
E-Value4.4E-80
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 118.462155838428
Replicate 220.597364420853
Replicate 321.505183034752
Condition 2: 8 Hour
Replicate 128.407623263782
Replicate 235.662873108347
Replicate 340.665288604337
Condition 3: 24 Hour
Replicate 112.57491448167
Replicate 217.311472311085
Replicate 321.220022599138


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_48853.p1 GENE.S_Transcript_48853~~S_Transcript_48853.p1 ORF type:complete len:271 (+),score=65.55 S_Transcript_48853:245-1057(+)
ATGAATTCTCTCTCGGTTTCCACACCCTCCTTAGTTCAATCACCCTACCGACAATTTCCACTTTGTAATAGACTGAGACTTCGATTTGATGGCCTCCCCAAGAACTCTCGTAGAGCATCTTTCTGTCATCATCTGTCTGTTGGGTTTTCATCTCGACAGCTGAATAGTGGATGTTCATTAGTTTGTGCATCACTTGCACCAGAAGAAGGGGTTATTCCTGTCATGAATATTGAAGAGCTAGTTGAGAAAGACTGGTCATTTTTGGAGCCTGATGGCATGAATTTGGAGGAAGACTGTGTCAAGAAGACTGAGCAAATAATCTCTGCTGGCAATGTTTTGGAAACATCAAAGGTTCTGGTTTCTATAGGTTCAGATGATTTTGTTGATCAGTTGGTTAGCTCTTCTCCCTGCCAACTTTTGCTTGTCACTCATGACTCCCTCCTATCACTTGCGTTGATAAAGGAGAGGCATGACAAGGTTAAGTGTTGGCAAGGAGAACTTATTTATGTACCTGAAAAATGGACACCTTTTGATGTTGTTTTCCTGTATTTCCTCCCTGCTTTGCCATTCAAACTTGATGAGATCTTTGAAGCGCTTTGCACTCGCTGTTCACCAGGTGCAAGAGTTGTGATAAGTCATCTCCAAGGAAGGCAGACTTTGGAGCAACAAAGTCAACAATACAATGATATTGTCGTCTCTGATTTACCTGATAAGATGTCTCTGGAGAAGGTTGCATCTGGTCGTTCATTTGTGGTCAAAGAGTATGTGGATGAGCCAAGTTTTTACATGGCAGTTTTAGAGTTCAAGGCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_48853.p1 GENE.S_Transcript_48853~~S_Transcript_48853.p1 ORF type:complete len:271 (+),score=65.55 S_Transcript_48853:245-1057(+)
MNSLSVSTPSLVQSPYRQFPLCNRLRLRFDGLPKNSRRASFCHHLSVGFSSRQLNSGCSLVCASLAPEEGVIPVMNIEELVEKDWSFLEPDGMNLEEDCVKKTEQIISAGNVLETSKVLVSIGSDDFVDQLVSSSPCQLLLVTHDSLLSLALIKERHDKVKCWQGELIYVPEKWTPFDVVFLYFLPALPFKLDEIFEALCTRCSPGARVVISHLQGRQTLEQQSQQYNDIVVSDLPDKMSLEKVASGRSFVVKEYVDEPSFYMAVLEFKA*

Click here to download the sequence:
Link to NCBI Protein BLAST