Transcript Information: S_Transcript_48860.p1


Annotated TAIR IDAT3G22160.1
Annotated Gene NameVQ motif-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:7818148-7818726 | Reverse length=192
E-Value1.1E-23
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.4646966563191
Replicate 29.4682416724558
Replicate 38.2133642477573
Condition 2: 8 Hour
Replicate 14.6622310814785
Replicate 23.532397153641
Replicate 34.4012478860488
Condition 3: 24 Hour
Replicate 15.6602127263078
Replicate 24.0372781755437
Replicate 36.1268124061011


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_48860.p1 GENE.S_Transcript_48860~~S_Transcript_48860.p1 ORF type:5prime_partial len:247 (+),score=14.86,VQ|PF05678.10|6.2e-10 S_Transcript_48860:2-742(+)
GATCTCCTCTACCCACCATTTACTAATCTTCTCTCCTTCACTTCCTTTACTTCCATCATCCCCATCCTTGCCTTTCTCTTCTACATGGGTAGCACAAGTGAATGGTTGCACTTCCACCACCACAACAATACCAACAACCCCTCGGCGGGCGGACAGTTGGCGGCCACTCAGGCTGCCACCTCAGCCTCCGACATCCTCTTCTGGTCGGCCCCGGAGGCGACCATGGTCTCGACCACCACCTCCGCCAACCCGCCTCTAGGCCCGGCCCAGTCCAACACCGGGCCGGCCCAGCTTGGCCCGGAGGGAAGGTTGGCCAAACCTGGCCGGCGTCGGACCCGGGCCTCGAGGCGGACCCCGACCACCCTCCTCAACACGGACACCACCAACTTCCGAGCTATGGTCCAGCAGTTCACGGGCGGGCCCAGCAGCACCGCCTTCTCGGTCCTCGGCGGCCCTAACACCTTCGCTATTGGGCCTGTCCGGGCTCAGATGGTTTCTGGGCCCGGGTACGGGCTCCAGTTCCCCTTGGCCCAACAACAGCCGCCACTACAGTTCAGCAACAACAACAACAACAATATGCTAGGAATGGGGGAGTTGTTCACAACAAGCAGTAGTACGGGAAATAATGTTGCAAACGTGAATGGTAATACAATGATGGTGGGCCCAGTGGGGACAGGTGGCGGGTCGTCATCAAGTGAGAACAGAAGCTGCAGTAATACCGTTGGTGGTTTTCAGTTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_48860.p1 GENE.S_Transcript_48860~~S_Transcript_48860.p1 ORF type:5prime_partial len:247 (+),score=14.86,VQ|PF05678.10|6.2e-10 S_Transcript_48860:2-742(+)
DLLYPPFTNLLSFTSFTSIIPILAFLFYMGSTSEWLHFHHHNNTNNPSAGGQLAATQAATSASDILFWSAPEATMVSTTTSANPPLGPAQSNTGPAQLGPEGRLAKPGRRRTRASRRTPTTLLNTDTTNFRAMVQQFTGGPSSTAFSVLGGPNTFAIGPVRAQMVSGPGYGLQFPLAQQQPPLQFSNNNNNNMLGMGELFTTSSSTGNNVANVNGNTMMVGPVGTGGGSSSSENRSCSNTVGGFQF*

Click here to download the sequence:
Link to NCBI Protein BLAST