Transcript Information: S_Transcript_488689.p1


Annotated TAIR IDAT1G43730.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16508723-16509784 | Reverse length=320
E-Value5E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.3748310033124
Replicate 20
Replicate 30.38963526937184
Condition 2: 8 Hour
Replicate 10.15017880505023
Replicate 20.15754822985723
Replicate 30
Condition 3: 24 Hour
Replicate 10.15383720768024
Replicate 20
Replicate 30.17762003102194


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_488689.p1 GENE.S_Transcript_488689~~S_Transcript_488689.p1 ORF type:5prime_partial len:142 (+),score=20.53 S_Transcript_488689:3-428(+)
CGGGATAAGCTACAACAAATTGGAGTGTGTCAGGATGTCTCCTATCCATTATGTGATAGTGATATAGAGTCCACTGCTTATTCGTTCTTTGCCTGCCCCTTCAGTGCTAGCATGATCAAGTGTTTCTGTGCTTGGTTTGGTGTCTCAAAGACTACTTGGAATCTGTTATCTTTTCAGAGATGGATGCTCAAGAATTCAGGCTTATCTAAAATAGGTATGAAGGTGCTATATGCTGGCTTTGTTGGTTTGATATACTCCATTTGGAAAGCTCGAAATTCTGCTGTTTGGGAGAGAAAGGTCCCAGTTCTAGACCAGACATTCAGGAAATTGCAAAGGCAGTTGCATATTAGAGTTGTTTCTTGTTTGCCAGAAAATGTTACCAAGCAGGATCAAGCTTGGGTAGCTAGGATGTTTTGGTTTGATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_488689.p1 GENE.S_Transcript_488689~~S_Transcript_488689.p1 ORF type:5prime_partial len:142 (+),score=20.53 S_Transcript_488689:3-428(+)
RDKLQQIGVCQDVSYPLCDSDIESTAYSFFACPFSASMIKCFCAWFGVSKTTWNLLSFQRWMLKNSGLSKIGMKVLYAGFVGLIYSIWKARNSAVWERKVPVLDQTFRKLQRQLHIRVVSCLPENVTKQDQAWVARMFWFD*

Click here to download the sequence:
Link to NCBI Protein BLAST