Transcript Information: S_Transcript_488798.p1


Annotated TAIR IDAT5G42905.1
Annotated Gene NamePolynucleotidyl transferase, ribonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:17201414-17202323 | Reverse length=258
E-Value0.0006
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.6389170212092
Replicate 23.6771315929191
Replicate 33.9276197215075
Condition 2: 8 Hour
Replicate 14.5415183082783
Replicate 25.8001089065958
Replicate 36.5131756570776
Condition 3: 24 Hour
Replicate 14.4498836740099
Replicate 27.3447537515941
Replicate 33.9701366193238


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_488798.p1 GENE.S_Transcript_488798~~S_Transcript_488798.p1 ORF type:5prime_partial len:108 (-),score=27.67,RVT_3|PF13456.2|1.2e-19 S_Transcript_488798:160-483(-)
AATGCTGCGGGTATTTGGATTTATGGCTTCTCCATTCGCTTCGAGCCGACTATGGTGGCGGCAGAGGTCTTAAGCCTGAGGGAAGGCCTTAAGATTGCATGGGAAAGGGACATCAAGAAAATTGAAGTTGAAATGGATGCTGTAGTGGTGTATGAGCTGATCAAGGACAAGGACAAGGCACTTTCTCATGAGTTAGGAGCTGCCTTTGAGGACATATTTCTGCTACTGAAGAAGGACTGGACTGTGATTTTCTCCCACACCAGACGTGAGGCGAACACAGTGGCTAATGCTATGGCAGCACTGGCCTATGATCTGGAGGAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_488798.p1 GENE.S_Transcript_488798~~S_Transcript_488798.p1 ORF type:5prime_partial len:108 (-),score=27.67,RVT_3|PF13456.2|1.2e-19 S_Transcript_488798:160-483(-)
NAAGIWIYGFSIRFEPTMVAAEVLSLREGLKIAWERDIKKIEVEMDAVVVYELIKDKDKALSHELGAAFEDIFLLLKKDWTVIFSHTRREANTVANAMAALAYDLEE*

Click here to download the sequence:
Link to NCBI Protein BLAST