Transcript Information: S_Transcript_488984.p1


Annotated TAIR IDAT3G07880.1
Annotated Gene NameImmunoglobulin E-set superfamily protein
Annotated Gene Symbol(s)SCN1
Annotation TypeOrtholog
Chromosome Positionchr3:2514175-2515544 | Forward length=240
E-Value1.3E-73
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.41260467031288
Replicate 20.17102937641484
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.16523912872079
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.19551972407067


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_488984.p1 GENE.S_Transcript_488984~~S_Transcript_488984.p1 ORF type:5prime_partial len:129 (+),score=17.48,Rho_GDI|PF02115.13|2.8e-55 S_Transcript_488984:3-389(+)
TCGATCGTCTCACCAGAGAGAGAAGACATTTTCCTTCCAATTCCAGAGGATGGAAAACCAAAAACACCATGGTTTACATTGAAGGAAGGCAGTCGTTACAACTTAAAGTTTACTTTCCAGGTTAATCACAACATTGTGGTAGGCCTCAAGTACACCAACACTGTGTGGAAAACTGGCTTGAAAGTGGATAGCACAAAAGAGATGCTTGGAACCTTTAGTCCTCAAGCAGAGCCATACACGCACGAGATGCCAGAGGAAATCACTCCCTCTGGCTATTTTGCCCGAGGATCATATACTGCTAAAACTAAGTTTCTTGATGATGATAACAAATGCTACTTAGAGATCAATTACACATTCGACATTCGTAAAGACTGGTTGAGTACATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_488984.p1 GENE.S_Transcript_488984~~S_Transcript_488984.p1 ORF type:5prime_partial len:129 (+),score=17.48,Rho_GDI|PF02115.13|2.8e-55 S_Transcript_488984:3-389(+)
SIVSPEREDIFLPIPEDGKPKTPWFTLKEGSRYNLKFTFQVNHNIVVGLKYTNTVWKTGLKVDSTKEMLGTFSPQAEPYTHEMPEEITPSGYFARGSYTAKTKFLDDDNKCYLEINYTFDIRKDWLST*

Click here to download the sequence:
Link to NCBI Protein BLAST