Transcript Information: S_Transcript_489124.p1


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value5E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.11673433628315
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.23673913904473
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_489124.p1 GENE.S_Transcript_489124~~S_Transcript_489124.p1 ORF type:3prime_partial len:189 (-),score=16.10,RVT_1|PF00078.23|3.4e-17 S_Transcript_489124:2-565(-)
ATGGGCCTCCCCATCCTACTCCGCACAACCATCATGGAATGTTTATCGTCGGCGTCGATGAAAATACTCTGGAATGGCAGCCCAACAGAGGCTTTTATCCCGACGAGAGGTATTAGACAAGGGGATCCTCTCTCCCCTTATCTTTTTGTGATGTGCATTGAACGACTCAATCAACTAATTGAGAAGGCTGTCCAGGATGGCCGATGGAGGCCAGTCAGGTGCAATCGAGGAGGACCACTTCTTTCTAACCTTTTCTTTGCAGATGACATGATACTCTTTGCAGAAGCAGATATCGATCAAGCTCATGTGATTAATCAATGTCTCGAAACCTTCTGCACTGCCTCCGGCCAGAAAGTTTCACATGCCAAATCAAGGGTTTTCTTTTCTAACAATGTCGACACTGCAAATGCGGACTTGATAGGAGCTGCACTAAATATACCACGAACGGATGATCTTGGTATCTATCTCGGGATGCCTCTTGTCAATGGCAGGGTGACCCGAGCCACCTATCAACACATAGTCGACAAAGTGGACAAGAAGCTTAGTGGTTGGAAGACAAACTGT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_489124.p1 GENE.S_Transcript_489124~~S_Transcript_489124.p1 ORF type:3prime_partial len:189 (-),score=16.10,RVT_1|PF00078.23|3.4e-17 S_Transcript_489124:2-565(-)
MGLPILLRTTIMECLSSASMKILWNGSPTEAFIPTRGIRQGDPLSPYLFVMCIERLNQLIEKAVQDGRWRPVRCNRGGPLLSNLFFADDMILFAEADIDQAHVINQCLETFCTASGQKVSHAKSRVFFSNNVDTANADLIGAALNIPRTDDLGIYLGMPLVNGRVTRATYQHIVDKVDKKLSGWKTNC

Click here to download the sequence:
Link to NCBI Protein BLAST