Transcript Information: S_Transcript_48980.p1


Annotated TAIR IDAT2G30520.1
Annotated Gene NamePhototropic-responsive NPH3 family protein
Annotated Gene Symbol(s)RPT2
Annotation TypeOrtholog
Chromosome Positionchr2:13002920-13005573 | Reverse length=593
E-Value3.7E-295
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1194.7736114918
Replicate 2207.29748857455
Replicate 3218.05063275024
Condition 2: 8 Hour
Replicate 145.787965899834
Replicate 238.435697925695
Replicate 327.736733398426
Condition 3: 24 Hour
Replicate 1173.42006455843
Replicate 2156.26519470417
Replicate 3158.09053752349


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_48980.p1 GENE.S_Transcript_48980~~S_Transcript_48980.p1 ORF type:complete len:571 (+),score=84.18,NPH3|PF03000.10|5.3e-76,BTB|PF00651.27|2.7e-10,BTB|PF00651.27|7.1e+02,BTB|PF00651.27|3.1e+03 S_Transcript_48980:167-1879(+)
ATGGGTACACCAGTATTGAACACCCGTCGTCGTTCCCTTGCCATGGAGAGGACAGGCCAATGGGTTTTCTCTCAAGATCTTCCTGCTGATGTGGTTGTACAAGTAGGAGATGCAACTTTTTCTCTTCACAAGTTCATGCTAGTGGCGAAGAGCAACTACATAAGAAAGCTAATACTGGAATCGAAGGAACCAGACTTGGGAAGAATTGATTTGTCTGACATCCCAGGAGGGTCTGAAACCTTTGAGAAAGCCGCGAAATTCTGCTATGGTGTTAATTTCGAGATAACAGTTCACAACGTGGCTGCACTGCGGTGTGCAGCTGAGTATCTGCAGATGACAGACAAGTTCTGTGAGAACAACCTTGCTGGTCGAACCGAGGACTTCCTCTGTCAAGTGGCCTTGACCACCCTCTCTGGTGCTGTTATTGTTCTGAAGACCTGTGAATCCCTCCTTCCTATGGCCCTCGATCTCAACATCGTTCAGAGATGTGTCGATGTCATAAGCTCCAAGGCATGTAGTGAGGCAAGCTTCCCTAGCCGAACCCCACCAAACTGGTGGACTGAAGAGTTATCAATCCTCGACATAGCCTCATTCCAGAAGGTTCTAATGACCATGAAATTACGAGGGGCAAAGACCCTCACTATCGCTAGTGCCATCATCACCTACTCTGAGAGGTCCCTGAGGGACTTGGTTCGAGATCATTCAGGAAACGGGATCAGATCTTCAGACTCAGTAAACACTGAGTTCAGACTCCAACAGCGAGAGCTCCTAGAGTCTATAGTCACCCTGTTGCCCTCAGAGAAAGCCGCGTTCCCCATCAGTTTCCTGTGCTCCCTTCTTCGATGTGCTATCTACCTTAAGGCGTCAGTGAGCTGCAAGAATGAGCTTGAGAAGCGAGTGTCAGCTATCCTAGAGCACGTGACAGTCGATGATCTTCTCGTGCTGTCGTTCACCTACGATGGAGAGAGCCTCTTTGATCTCGAGAGTGTGAGGAAGATCATCTCAGGATTCGTAGCCAAGGAAAAGAGCGTGGATGTCTTCAACGGAGGTAACTTCAGAGACGTTTCCTCAGCTGCGATGCTGAGGGTTGCCAAGACTGTGGATTCTTATCTTGCTGAGATAGCTACTTATGCAGAACTCAGCATTTCTAAGTTCAATGGCATTGCTAATCTTGTCCCTAAAGGTGCTAGAAGGATGGATGATGACCTTTATAGAGCAATTGACATCTATCTCAAGGCACATCCAAATCTCGACGAGATAGAGAGGGAGAAAGTGTGTAGCGCAATGGATCCCTTGAAGCTAACCTATGAAGCTCGAATCCACGCCTCACAGAACAAACGACTGCCAGTACAGATCGTCCTGCACGCCCTCTACTATGATCAGCTTAAACTAAGAAGTGGAGCAAACGAAGGCAATAACATAGCTGATGCTGTAGCGACAAGGGGTCAATTGCAGGCTGACGTCTCCTTAGTGAAGGAGAACGAGGCCTTAAGATCCGAGCTTATGAAGATGAAGATGTTCATCTCGGATATGCAGAGAAACCAGGGGACTTCCTCCAAGTCGACTGTACCAAAAAAGCCTACATTCTTCTCTTCAATGTCTAAGACTCTTGGTAAATTGAACCCCTTCAAACATGGTTCTAAGGATACTTCTCATTTGGATGATGGGGTGGATATCACCAAGCCAAGAAGAAGAAGGTTCTCCATCTCCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_48980.p1 GENE.S_Transcript_48980~~S_Transcript_48980.p1 ORF type:complete len:571 (+),score=84.18,NPH3|PF03000.10|5.3e-76,BTB|PF00651.27|2.7e-10,BTB|PF00651.27|7.1e+02,BTB|PF00651.27|3.1e+03 S_Transcript_48980:167-1879(+)
MGTPVLNTRRRSLAMERTGQWVFSQDLPADVVVQVGDATFSLHKFMLVAKSNYIRKLILESKEPDLGRIDLSDIPGGSETFEKAAKFCYGVNFEITVHNVAALRCAAEYLQMTDKFCENNLAGRTEDFLCQVALTTLSGAVIVLKTCESLLPMALDLNIVQRCVDVISSKACSEASFPSRTPPNWWTEELSILDIASFQKVLMTMKLRGAKTLTIASAIITYSERSLRDLVRDHSGNGIRSSDSVNTEFRLQQRELLESIVTLLPSEKAAFPISFLCSLLRCAIYLKASVSCKNELEKRVSAILEHVTVDDLLVLSFTYDGESLFDLESVRKIISGFVAKEKSVDVFNGGNFRDVSSAAMLRVAKTVDSYLAEIATYAELSISKFNGIANLVPKGARRMDDDLYRAIDIYLKAHPNLDEIEREKVCSAMDPLKLTYEARIHASQNKRLPVQIVLHALYYDQLKLRSGANEGNNIADAVATRGQLQADVSLVKENEALRSELMKMKMFISDMQRNQGTSSKSTVPKKPTFFSSMSKTLGKLNPFKHGSKDTSHLDDGVDITKPRRRRFSIS*

Click here to download the sequence:
Link to NCBI Protein BLAST