Transcript Information: S_Transcript_489903.p2


Annotated TAIR IDAT3G10920.1
Annotated Gene Namemanganese superoxide dismutase 1
Annotated Gene Symbol(s)MSD1, MEE33, ATMSD1
Annotation TypeHomolog
Chromosome Positionchr3:3418015-3419581 | Forward length=231
E-Value3E-56
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.4912457588679
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_489903.p2 GENE.S_Transcript_489903~~S_Transcript_489903.p2 ORF type:complete len:232 (+),score=6.58,Sod_Fe_C|PF02777.14|2.8e-38,Sod_Fe_N|PF00081.18|2.8e-30 S_Transcript_489903:36-731(+)
ATGTCGTCTACTCTCCTCCGAACCGCTCCCGTCCTCCGCACGGCTCTGCGAGCTGGTGCCGCTAAGCCTGCTGCTGCTGCCATGGGCACCAGCTTCGTTCGCGGAAAGGCTACGCTGCCCGATATTTCCTACGACTACGGTGCTCTCGAGCCTTACATCTCCGGCCAGATCATGGAGCTTCACCACTCCAAGCACCACCAGACCTACGTCAACGGCCTCAACACCGCCCTCGAGACCGTCGAGGAGGCCAAGGCCAAGGGCGACTTCGCCAAGGCTGCCGCCCAGGCTCCTCTGATCAACTTCCACGGAGGTGGTCACATCAACCACACCCTTTTCTGGGAGAACCTCGCTCCTGCTAGCCGCGATGGCGGTGGTGAGCCCGGCGGCAAGCTGGCTCAAGCTATCACCAAGGACTTCGGTTCTTTCGAGACTCTGCGCAAGCAGATTAACACCTCCCTGGCCGGTATTCAGGGCAGCGGCTGGGCCTGGCTCGTCAAGGACAAGACCAGCGGCACCCTCGGCGTTGTTACCCGCGCCAACCAGGACCCCGTCACCGGTAACCTCGAGCCCCTCCTGGGCATTGACGCTTGGGAGCACGCCTACTACCTGCAGTACCAGAACCGCAAGGCCGAGTACTTTGACGCCATCTGGAACGTTGTCAACTGGAAGACCGTTGCCAAGCGCTTCGAGAAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_489903.p2 GENE.S_Transcript_489903~~S_Transcript_489903.p2 ORF type:complete len:232 (+),score=6.58,Sod_Fe_C|PF02777.14|2.8e-38,Sod_Fe_N|PF00081.18|2.8e-30 S_Transcript_489903:36-731(+)
MSSTLLRTAPVLRTALRAGAAKPAAAAMGTSFVRGKATLPDISYDYGALEPYISGQIMELHHSKHHQTYVNGLNTALETVEEAKAKGDFAKAAAQAPLINFHGGGHINHTLFWENLAPASRDGGGEPGGKLAQAITKDFGSFETLRKQINTSLAGIQGSGWAWLVKDKTSGTLGVVTRANQDPVTGNLEPLLGIDAWEHAYYLQYQNRKAEYFDAIWNVVNWKTVAKRFEK*

Click here to download the sequence:
Link to NCBI Protein BLAST