Transcript Information: S_Transcript_49012.p1


Annotated TAIR IDAT5G53620.1
Annotated Gene Nameunknown protein; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 28929 Blast hits to 19542 proteins in 1425 species: Archae - 211; Bacteria - 3079; Metazoa - 14558; Fungi - 2157; Plants - 966; Viruses - 80; Other Eukaryotes - 7878 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:21781217-21785061 | Forward length=682
E-Value6E-166
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 120.176967079151
Replicate 223.39669460936
Replicate 322.256167607537
Condition 2: 8 Hour
Replicate 128.158798338947
Replicate 227.674003819154
Replicate 328.146197804885
Condition 3: 24 Hour
Replicate 120.867542874933
Replicate 221.046925381662
Replicate 320.311827779695


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_49012.p1 GENE.S_Transcript_49012~~S_Transcript_49012.p1 ORF type:complete len:827 (+),score=228.50 S_Transcript_49012:506-2986(+)
ATGGAGTCTGCGACCGGTGCTTCTCGTAAAGAGTGGCGTGTCGTCTCCGAAAACTCCTCCCTTCATAACTCTTCACACGAGCAGGGACAAGAGGGACTTGATGCAGTAGTAGACTTTTGTTCAATACAAATGGATGGGATTATGGGGGTTGATGATGGTATTGTACAGCAGAAAATTCATACTTTGTCTAGGCAAAGAGAAGAGTTGCAGCAAATGGAGATTGAGCTTCGCGCTCAGATCATTGCCAAATCCGAGATTATCGAAATGCAGAACAGTTTTGATGCTCGCTTGAAGGACCAGGCTAATGTCACTGCTAGGCTTCAGGAGCAACTTCGTGAAAGGGAGCAAGAAATGCATGAGCTAGAGAGGAAGATGGAGGAGAAGGAAAGGGAGTTGCATGCTGTTCGATTGGACAACGAAGCTGCTTGGGCTAATGAAGACCTACTGAGGGAGCAGAACAAAGAACTAGCAAACTTTCGGAGGGAGCGGGATAGTATTGAAGCTGAGAGAGCTCACCATATAAAACAGATACATGATCTCCAAGAGCATCTTCAGGATAAAGAGAGGCAGTTGCTGGAGTTGCAAGAACAGCATAGGGTAGCTCAAGAGACCATCCTCTACAAGGATGAACAGATAAGAGAAGCACAAGCATGGATGGCACGCATGCAGGAAATGGACGTCTTGCAATCAACTAATTTGCAAGCTGAGTTACGGGAACGTACAGATCAGTATAACCAACTCTGGCTTGGTTGTCAACGACAGTTTGCAGAGATGGAGAGGTTGCACATGCAGACAATTCAACAGCTTCAGCTTGAGCTGTCTGGTGCAAGAGGAAAGAGTGGAGCCTTTAACAATGAATCAAGTATCTCACAGAATGCTTCAAGTGATGGATCTCAAATTGGACCAAACAGTGGAAGTCATGTTGAAGCTAATGGAGGTGGTACACCAGGTGATAGTTCTGGGATTCTTCCAAACGGAACTTCAGAAAATTCTCAGACATTTGTTTCCTCTGGAAATGCTTCTACACAGACCAACCATGTTCCGAGTCTTCCAATTACTCCACCTTCCATGTTCGGGGTGCCTTCTTATCTTCAACCTGGACAGGTCACTGCTTTGCATCCATATGTCATGCATCAACCAGGAACCAATAACTCTGTGCCATCACATGTTCCTCAGTCCCATCTTGGCCAGTTTCATTCTGTTCCAGCTATGGCGTCGTTCCAGCAGTGGCACAACCAACAGGCCGTGTCAGAAAGTGCACCAAGGTCCTCTCAGAACCAATATTCACTGCCCCAGAATGAAGAAAATCCTTCAAGGCCAGAGTCTAATTACAGTTATGAGTTATCTGTGAATGGACCAAGTCTGCATCCAGACTATCTGAATGCTCATACGAGCCAAGGATTAGTTCGCTGTGAATTGCCATCTCTTGATGAGTCAGAGGCCCTTGTGCGAATAAGAGAAATGTTAACGGGTGATCCTGAGACTCACCATAGCTTGCAGCAGATTTCGTCACAGTTTCATGAGGCATTGCGCTTGGAACCTCTCAATGAGACTAGTGAAATCAAGGAGAATGATGCCATGAATGCGGTCGATAATGGACCAGAACATCAAGATGTGACTGTAGAACAAACAAGTTCTGCTGCCAGCCCATCACCATCTGAAGCATCTGTTCACCCTGCGCATTTTGCTGAAGCTACAGTGAACAGTACTACTGATGCTGTTCTGTCTGAATCATTTGTCTCAGCTGGGCAGACAAATTCTTTGTCAAGTGGAAAGGTACCAGAGCCTGCTCTCCTTGATGAAAGAGCACTGTTAGCTTGCATTGTTCGAACGATCCCGGCTGGAGGCAAGATCCGTATCAGTTCAACGCTTCCGAATAGACTTGGGAAGATGCTTGCACCTCTCCACTGGCATGATTACAAAAAGAAGTATGGTAAGCTTGATGAGTTTGTGTCCAGTCACCCTGAACTTTTTGTGATTGAAGAGGACTACATTCAACTTCGAGAAGGAGCACAAGGGATAATTGCAGCTACAGCAGCAGTGGCAAAAGTTGCTGCAGCTGCTGCAGCATCATCTCCTTACTCAAACTTTTTTCCTTCTGTGGCCGTCACACCAATGGCGCATGCTGGTCGAGTTAGGAAGATTCCGTCCCTGGAGTCAAAGCCTGTGAGAAATCCTGCTGATTGTACACATCCGTCAGCTACTCAGAACCACCATTCAAATGGTGCCAGCTTCAGTGCTTCTGGAGTCCTGTCCAACGTGAAAATTTTGAGCAAGTCAAAAGATCAATTGGAGCATAACAATTCTGAAATTAGACCTGGCCAGACCCTACTTGTGCCTGCTGAGAATAGTGCACATTCTGATAGATCTGTGCTTGGCAATCCACAAAGCAAGGGGCCAATTCATGCAAGGGCTGCTGTTGGCTATGTGGGCAGACAGCAGAGCAGGACCACTTCTGCACAAATGGCATCCAGAAGATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_49012.p1 GENE.S_Transcript_49012~~S_Transcript_49012.p1 ORF type:complete len:827 (+),score=228.50 S_Transcript_49012:506-2986(+)
MESATGASRKEWRVVSENSSLHNSSHEQGQEGLDAVVDFCSIQMDGIMGVDDGIVQQKIHTLSRQREELQQMEIELRAQIIAKSEIIEMQNSFDARLKDQANVTARLQEQLREREQEMHELERKMEEKERELHAVRLDNEAAWANEDLLREQNKELANFRRERDSIEAERAHHIKQIHDLQEHLQDKERQLLELQEQHRVAQETILYKDEQIREAQAWMARMQEMDVLQSTNLQAELRERTDQYNQLWLGCQRQFAEMERLHMQTIQQLQLELSGARGKSGAFNNESSISQNASSDGSQIGPNSGSHVEANGGGTPGDSSGILPNGTSENSQTFVSSGNASTQTNHVPSLPITPPSMFGVPSYLQPGQVTALHPYVMHQPGTNNSVPSHVPQSHLGQFHSVPAMASFQQWHNQQAVSESAPRSSQNQYSLPQNEENPSRPESNYSYELSVNGPSLHPDYLNAHTSQGLVRCELPSLDESEALVRIREMLTGDPETHHSLQQISSQFHEALRLEPLNETSEIKENDAMNAVDNGPEHQDVTVEQTSSAASPSPSEASVHPAHFAEATVNSTTDAVLSESFVSAGQTNSLSSGKVPEPALLDERALLACIVRTIPAGGKIRISSTLPNRLGKMLAPLHWHDYKKKYGKLDEFVSSHPELFVIEEDYIQLREGAQGIIAATAAVAKVAAAAAASSPYSNFFPSVAVTPMAHAGRVRKIPSLESKPVRNPADCTHPSATQNHHSNGASFSASGVLSNVKILSKSKDQLEHNNSEIRPGQTLLVPAENSAHSDRSVLGNPQSKGPIHARAAVGYVGRQQSRTTSAQMASRR*

Click here to download the sequence:
Link to NCBI Protein BLAST