Transcript Information: S_Transcript_49121.p1


Annotated TAIR IDAT3G48990.1
Annotated Gene NameAMP-dependent synthetase and ligase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:18159031-18161294 | Reverse length=514
E-Value1.6E-261
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1714.60836650022
Replicate 2681.20665274314
Replicate 3664.74210406773
Condition 2: 8 Hour
Replicate 124.624089037212
Replicate 219.20372192604
Replicate 320.712130788283
Condition 3: 24 Hour
Replicate 1604.85103329403
Replicate 2612.86106598175
Replicate 3594.33906816064


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_49121.p1 GENE.S_Transcript_49121~~S_Transcript_49121.p1 ORF type:complete len:459 (+),score=37.30,AMP-binding|PF00501.24|4.5e-83,AMP-binding_C|PF13193.2|3.3e-15 S_Transcript_49121:990-2366(+)
ATGGGTGTACAGTTTGTGATAGCGTTCTTGGCGGTGATACGAGCAAGAGCAACAGCGGCTCCACTGAACCCGGCTTACACAGCCGAGGAGTTCGAGTTTTACTTGTCAGACTCAGAATCCAAGCTCCTTCTAACTTCCTTAGAAGGCAACAAAGAAGCCGAAGCCGCGGCTTCCAAGCTCAACATCCCTCACGCCACTGCTTCACTTCCCGACTCTGACTCGGACCTCACTCTCTCCCTGACTCAGCCCGAGTCCCACTCGGTGGCCGAACTCACCAACGACCCGTCCGATGTGGCCCTGTTCCTCCACACCTCGGGGACCACCAGCCGCCCCAAGGGGGTCCCACTGAGTCAACTCAACCTGGTCTCCTCGGTCCGGAACATCAAATCGGTGTACCGAATCACCGAGTCAGACTCGACGGTCATAGTCCTCCCGCTCTTCCACGTGCACGGGTTGATGGCCGCGTTGCTGAGTTCACTCGGAGCCGGCGCCGCCGTGACCCTCCCCGCTGCGGGGCGGTTCTCGGCGTCGTCGTTTTGGTCCGACATGAACAAATACAACGCCACGTGGTACACCGCGGTCCCCACCATCCACCAGATCATCCTCGACCGGCACCTCAACAAACCCGAACCGAATTACCCGAACCTGCGGTTCATCCGGAGCTGCAGCGCGTCGCTGGCTCCGGCTATCTTGGAGCGCCTCGAAGAGTCCTTTGGGGCGCCCGTCCTGGAGGCCTATGCTATGACGGAGGCCTCCCATTTAATGTGCTCGAACCCCTTACCCCAAGAAGGGCCCCACAAGGCAGGCTCAGTTGGGAGGCCTGTGGGGCAAAAGATGGCGGTTTTAGATGAGAATGGGGTTGCCCAAGGACCTGGGTCCAAAGGAGAAGTGTGCATTTGGGGTCCAAATGTAACAAAAGGGTACAAAAATAACCCGGAAGCTAATAAGGCTGCTTTTCAATTCGGGTGGTTCCATACCGGTGATGTTGGTTATTTTGATGAGGAGGGGTACTTGCATTTGGTTGGCCGTATTAAGGAGCTCATCAACCGTGGAGGGGAAAAGATTTCTCCAATTGAAGTGGATGCAGTGCTTTTGTCGCATCCAGAAATCGCTCAAGCTGTTGCTTTCGGAGTTCCGGATGACAAGTATGGTGAAGAGATAAATTGTGCCGTAATTCCCAGAGAAGGGGCAAAACTTGACGAGACAGCGGTGACAAGCTTCTGCAAGAATAACCTAGCATCTTTCAAGGTTCCTAAGAAGGTTTTCATGACTGATTTTCTACCAAAAACCGCGACTGGGAAGATTCAGAGAAGAATCGTGGCAGAACACTTCCTTGCACAGATCTCAACCGCCAAAGTTCCCAAGTTTGGGGCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_49121.p1 GENE.S_Transcript_49121~~S_Transcript_49121.p1 ORF type:complete len:459 (+),score=37.30,AMP-binding|PF00501.24|4.5e-83,AMP-binding_C|PF13193.2|3.3e-15 S_Transcript_49121:990-2366(+)
MGVQFVIAFLAVIRARATAAPLNPAYTAEEFEFYLSDSESKLLLTSLEGNKEAEAAASKLNIPHATASLPDSDSDLTLSLTQPESHSVAELTNDPSDVALFLHTSGTTSRPKGVPLSQLNLVSSVRNIKSVYRITESDSTVIVLPLFHVHGLMAALLSSLGAGAAVTLPAAGRFSASSFWSDMNKYNATWYTAVPTIHQIILDRHLNKPEPNYPNLRFIRSCSASLAPAILERLEESFGAPVLEAYAMTEASHLMCSNPLPQEGPHKAGSVGRPVGQKMAVLDENGVAQGPGSKGEVCIWGPNVTKGYKNNPEANKAAFQFGWFHTGDVGYFDEEGYLHLVGRIKELINRGGEKISPIEVDAVLLSHPEIAQAVAFGVPDDKYGEEINCAVIPREGAKLDETAVTSFCKNNLASFKVPKKVFMTDFLPKTATGKIQRRIVAEHFLAQISTAKVPKFGA*

Click here to download the sequence:
Link to NCBI Protein BLAST