Transcript Information: S_Transcript_49127.p1


Annotated TAIR IDAT3G48990.1
Annotated Gene NameAMP-dependent synthetase and ligase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:18159031-18161294 | Reverse length=514
E-Value2.9E-260
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1293.93375189728
Replicate 2305.76953312932
Replicate 3311.5873443028
Condition 2: 8 Hour
Replicate 113.501309753353
Replicate 212.512219597163
Replicate 312.303106671332
Condition 3: 24 Hour
Replicate 1272.30355885814
Replicate 2247.83156819952
Replicate 3238.73483194194


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_49127.p1 GENE.S_Transcript_49127~~S_Transcript_49127.p1 ORF type:internal len:447 (+),score=34.26,AMP-binding|PF00501.24|2.1e-91,AMP-binding_C|PF13193.2|3e-08 S_Transcript_49127:3-1340(+)
TTACACCATTTGGTCGAACTTGCCGCTTCTCGTCTTGCTGCTTCCGGTGTTTGTCCTGGCGATGTTGTTGCCCTCACCTTCCCTAACAACATCGAGTTTGTGATAGCGTTCTTGGCGGTGATACGAGCAAGAGCAACAGCGGCTCCACTGAACCCGGCTTACACAGCCGAGGAGTTCGAGTTTTACTTGTCAGACTCAGAATCCAAGCTCCTTCTAACTTCCTTAGAAGGCAACAAGGAAGCCGAAGCCGCGGCTTCCGAGCTCAACATCCCCCACGCCACGGCTTCACTTCCCGACTCTGACTCGGACCTCACTCTCTCCCTGACTCAGCCCGAGTCCCACTCGGTGGCCGAACTCACCAACGACCCGTCCGATGTGGCCCTGTTCCTCCACACCTCGGGGACCACCAGCCGCCCCAAGGGGGTCCCACTGAGTCAACTCAACCTGGTCTCCTCGGTCCGGAACATCAAATCGGTGTACCGAATCACCGAGTCGGACTCGACAGTCATAGTCCTCCCGCTCTTCCATGTGCACGGGTTGATGGCCGCGTTGCTGAGTTCACTCGGAGCCGGCGCCGCCGTGACCCTCCCCGCTGCGGGGCGGTTTTCGGCGTCGTCGTTTTGGACCGACATGAACAAGTACAACGCCACGTGGTACACCGCGGTCCCCACCATCCACCAGATCATCCTCGACCGGCACCTCAACAAACCCGAACCGAATTACCCGAACCTGCGGTTCATCCGGAGCTGCAGCGCGTCGCTGGCTCCGGCTATCTTGGAGCGCCTCGAAGAGTCCTTTGGGGCGCCCGTCCTGGAGGCCTATGCTATGACGGAGGCCTCCCATTTAATGTGCTCGAACCCCTTACCCCAAGAAGGGCCCCACAAGGCAGGCTCAGTTGGGAGGCCTGTGGGGCAAAAGATGGCGGTTTTAGATGAGAATGGGGTTGCCCAAGGACCTGGGTCCAAAGGAGAAGTGTGCATTTGGGGTCCAAATGTAACAAAAGGGTACAAAAATAACCCGGAAGCTAATAAGGCTGCTTTTCAATTCGGGTGGTTCCATACCGGTGATGTTGGTTATTTTGATGAGGAGGGGTACTTGCATTTGGTTGGCCGTATTAAGGAGCTCATCAACCGTGGAGGGGAAAAGATTTCTCCAATTGAAGTGGATGCAGTGCTTTTGTCGCATCCGGAAATCGCTCAAGCCGTTGCTTTCGGAGTTCCGGATGACAAGTATGGTGAAGAGATAAATTGTGCCGTAATTCCCAGAGAAGGGGCAAAACTTGACGAGGAAGCGGTGACCATCTTCTGTAAGAAAAACCTAGCATCATTCAAGGTTCCC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_49127.p1 GENE.S_Transcript_49127~~S_Transcript_49127.p1 ORF type:internal len:447 (+),score=34.26,AMP-binding|PF00501.24|2.1e-91,AMP-binding_C|PF13193.2|3e-08 S_Transcript_49127:3-1340(+)
LHHLVELAASRLAASGVCPGDVVALTFPNNIEFVIAFLAVIRARATAAPLNPAYTAEEFEFYLSDSESKLLLTSLEGNKEAEAAASELNIPHATASLPDSDSDLTLSLTQPESHSVAELTNDPSDVALFLHTSGTTSRPKGVPLSQLNLVSSVRNIKSVYRITESDSTVIVLPLFHVHGLMAALLSSLGAGAAVTLPAAGRFSASSFWTDMNKYNATWYTAVPTIHQIILDRHLNKPEPNYPNLRFIRSCSASLAPAILERLEESFGAPVLEAYAMTEASHLMCSNPLPQEGPHKAGSVGRPVGQKMAVLDENGVAQGPGSKGEVCIWGPNVTKGYKNNPEANKAAFQFGWFHTGDVGYFDEEGYLHLVGRIKELINRGGEKISPIEVDAVLLSHPEIAQAVAFGVPDDKYGEEINCAVIPREGAKLDEEAVTIFCKKNLASFKVP

Click here to download the sequence:
Link to NCBI Protein BLAST