Transcript Information: S_Transcript_49157.p1


Annotated TAIR IDAT2G27030.3
Annotated Gene Namecalmodulin 5
Annotated Gene Symbol(s)CAM5
Annotation TypeOrtholog
Chromosome Positionchr2:11532069-11534176 | Forward length=181
E-Value9.4E-84
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.7464904651468
Replicate 22.891724844917
Replicate 32.5963075069146
Condition 2: 8 Hour
Replicate 110.352131221909
Replicate 212.706341217709
Replicate 38.6918990233904
Condition 3: 24 Hour
Replicate 17.8471911568154
Replicate 27.9213322014418
Replicate 36.121855438135


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_49157.p1 GENE.S_Transcript_49157~~S_Transcript_49157.p1 ORF type:5prime_partial len:206 (+),score=57.89,EF-hand_1|PF00036.28|4e+02,EF-hand_1|PF00036.28|2.8e-08,EF-hand_1|PF00036.28|3.3e-09,EF-hand_1|PF00036.28|5.4e-10,EF-hand_8|PF13833.2|1.4e-11,EF-hand_8|PF13833.2|0.51,EF-hand_8|PF13833.2|1.2e-14,EF-hand_7|PF13499.2|1.8e-06,EF-hand_7|PF13499.2|6.3e-19,EF-hand_6|PF13405.2|93,EF-hand_6|PF13405.2|0.016,EF-hand_6|PF13405.2|4.2e-08,EF-hand_6|PF13405.2|0.0019,EF-hand_5|PF13202.2|3.6e+03,EF-hand_5|PF13202.2|0.00013,EF-hand_5|PF13202.2|3.2e-06,EF-hand_5|PF13202.2|0.00014,EF-hand_9|PF14658.2|0.00042,EF-hand_9|PF14658.2|4.8e-05,EF-hand_4|PF12763.3|4.9,EF-hand_4|PF12763.3|8e-05 S_Transcript_49157:3-620(+)
ATCACCACCAAGGAGCTTGGAACAGTGATGCGTTCACTTGGACAAAACCCAACTGAAGCAGAGCTCCAGGACATGATAAATGAAGTGGATGCTGATGGAAATGGAACTATCGATTTCCCAGAGTTCCTCAACCTGATGGCCAGGAAGATGAAGGATACCGACTCAGAGGAGGAGCTGAAGGAAGCTTTCAGAGTTTTCGACAAGGATCAAAACGGTTTCATCTCTGCAGCTGAGCTTCGCCATGTCATGACAAACCTTGGTGAGAAGCTGACCGACGAAGAAGTTGATGAGATGATCCGTGAAGCTGACGTAGATGGTGATGGCCAGATCAACTACGAGGAGTTTGTCAAGGTTATGATGGCCAAGAAGAGGAGATTTCAGGAACATGGACATCATCCAAGAAAGGAAAGGCGAAGGCGAAAGGCCAACTCAAGTTGGAGGATGCGATGTAAATCATGGTTTTGTTCCAACAAAATAGGGGCAGGGGGCAGATGGACAGAAAGACCTGAGATGCCGAGATTTCAGCAGGAAAGAGAAAGCATGCAGAACCCAAAACAGTGTCGTTCAAGTCTTGAGAATGTAGCATCACATTTAAAAAGGATTGCTCGACATGAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_49157.p1 GENE.S_Transcript_49157~~S_Transcript_49157.p1 ORF type:5prime_partial len:206 (+),score=57.89,EF-hand_1|PF00036.28|4e+02,EF-hand_1|PF00036.28|2.8e-08,EF-hand_1|PF00036.28|3.3e-09,EF-hand_1|PF00036.28|5.4e-10,EF-hand_8|PF13833.2|1.4e-11,EF-hand_8|PF13833.2|0.51,EF-hand_8|PF13833.2|1.2e-14,EF-hand_7|PF13499.2|1.8e-06,EF-hand_7|PF13499.2|6.3e-19,EF-hand_6|PF13405.2|93,EF-hand_6|PF13405.2|0.016,EF-hand_6|PF13405.2|4.2e-08,EF-hand_6|PF13405.2|0.0019,EF-hand_5|PF13202.2|3.6e+03,EF-hand_5|PF13202.2|0.00013,EF-hand_5|PF13202.2|3.2e-06,EF-hand_5|PF13202.2|0.00014,EF-hand_9|PF14658.2|0.00042,EF-hand_9|PF14658.2|4.8e-05,EF-hand_4|PF12763.3|4.9,EF-hand_4|PF12763.3|8e-05 S_Transcript_49157:3-620(+)
ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAKKRRFQEHGHHPRKERRRRKANSSWRMRCKSWFCSNKIGAGGRWTERPEMPRFQQERESMQNPKQCRSSLENVASHLKRIARHE*

Click here to download the sequence:
Link to NCBI Protein BLAST