Transcript Information: S_Transcript_49158.p1


Annotated TAIR IDAT2G27030.3
Annotated Gene Namecalmodulin 5
Annotated Gene Symbol(s)CAM5
Annotation TypeOrtholog
Chromosome Positionchr2:11532069-11534176 | Forward length=181
E-Value1.8E-105
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1333.89580086285
Replicate 2280.35886242598
Replicate 3250.10149420688
Condition 2: 8 Hour
Replicate 1331.11569453383
Replicate 2303.82061762439
Replicate 3337.51825036961
Condition 3: 24 Hour
Replicate 1207.25999214247
Replicate 2240.67862342297
Replicate 3264.89298343519


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_49158.p1 GENE.S_Transcript_49158~~S_Transcript_49158.p1 ORF type:3prime_partial len:205 (+),score=57.71,EF-hand_1|PF00036.28|3.9e-09,EF-hand_1|PF00036.28|2.8e-08,EF-hand_1|PF00036.28|3.2e-09,EF-hand_1|PF00036.28|5.3e-10,EF-hand_7|PF13499.2|2.7e-14,EF-hand_7|PF13499.2|6.2e-19,EF-hand_6|PF13405.2|1.8e-09,EF-hand_6|PF13405.2|0.015,EF-hand_6|PF13405.2|4.1e-08,EF-hand_6|PF13405.2|0.0018,EF-hand_8|PF13833.2|3.4,EF-hand_8|PF13833.2|2.2e-13,EF-hand_8|PF13833.2|0.5,EF-hand_8|PF13833.2|1.2e-14,EF-hand_5|PF13202.2|0.00016,EF-hand_5|PF13202.2|0.00013,EF-hand_5|PF13202.2|3.2e-06,EF-hand_5|PF13202.2|0.00014,EF-hand_9|PF14658.2|3.3e-08,EF-hand_9|PF14658.2|4.7e-05,EF-hand_4|PF12763.3|0.13,EF-hand_4|PF12763.3|8e-05,SPARC_Ca_bdg|PF10591.5|0.081,SPARC_Ca_bdg|PF10591.5|0.0023,SPARC_Ca_bdg|PF10591.5|1e+03 S_Transcript_49158:182-793(+)
ATGGCCGATCAGCTCAGCGATGATCAGATCTCTGAATTTAAGGAAGCCTTCAGTCTTTTTGACAAGGATGGCGATGGTTGTATCACCACCAAGGAGCTTGGAACAGTGATGCGTTCACTTGGACAAAACCCAACTGAAGCAGAGCTCCAGGACATGATAAATGAAGTGGATGCTGATGGAAATGGAACTATCGATTTCCCAGAGTTCCTCAACCTGATGGCCAGGAAGATGAAGGATACCGACTCAGAGGAGGAGCTGAAGGAAGCTTTCAGAGTTTTCGACAAGGATCAAAACGGTTTCATCTCTGCAGCTGAGCTTCGCCATGTCATGACAAACCTTGGTGAGAAGCTGACCGACGAAGAAGTTGATGAGATGATCCGTGAAGCTGACGTAGATGGTGATGGCCAGATCAACTACGAGGAGTTTGTCAAGGTTATGATGGCCAAGAAGAGAAAGAGATTTCAGGAACATGGACATCATCCAAGAAAGGAAAGGCGAAGGCGAAAGGCCAACTCAAGTTGGAGGATGCGATGTAAATCATGGTTTTGTTCCAACAAAGTGTGCGTTTTCCCCTTTCTCATTCCTTCCTCGTACAGTGTAGATTTTTCAGAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_49158.p1 GENE.S_Transcript_49158~~S_Transcript_49158.p1 ORF type:3prime_partial len:205 (+),score=57.71,EF-hand_1|PF00036.28|3.9e-09,EF-hand_1|PF00036.28|2.8e-08,EF-hand_1|PF00036.28|3.2e-09,EF-hand_1|PF00036.28|5.3e-10,EF-hand_7|PF13499.2|2.7e-14,EF-hand_7|PF13499.2|6.2e-19,EF-hand_6|PF13405.2|1.8e-09,EF-hand_6|PF13405.2|0.015,EF-hand_6|PF13405.2|4.1e-08,EF-hand_6|PF13405.2|0.0018,EF-hand_8|PF13833.2|3.4,EF-hand_8|PF13833.2|2.2e-13,EF-hand_8|PF13833.2|0.5,EF-hand_8|PF13833.2|1.2e-14,EF-hand_5|PF13202.2|0.00016,EF-hand_5|PF13202.2|0.00013,EF-hand_5|PF13202.2|3.2e-06,EF-hand_5|PF13202.2|0.00014,EF-hand_9|PF14658.2|3.3e-08,EF-hand_9|PF14658.2|4.7e-05,EF-hand_4|PF12763.3|0.13,EF-hand_4|PF12763.3|8e-05,SPARC_Ca_bdg|PF10591.5|0.081,SPARC_Ca_bdg|PF10591.5|0.0023,SPARC_Ca_bdg|PF10591.5|1e+03 S_Transcript_49158:182-793(+)
MADQLSDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAKKRKRFQEHGHHPRKERRRRKANSSWRMRCKSWFCSNKVCVFPFLIPSSYSVDFSE

Click here to download the sequence:
Link to NCBI Protein BLAST