Transcript Information: S_Transcript_491598.p1


Annotated TAIR IDAT1G20693.1
Annotated Gene Namehigh mobility group B2
Annotated Gene Symbol(s)HMGB2, HMG BETA 1, NFD2, NFD02
Annotation TypeHomolog
Chromosome Positionchr1:7177282-7178487 | Forward length=144
E-Value7E-16
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.1511762241488
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.35775949510803


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_491598.p1 GENE.S_Transcript_491598~~S_Transcript_491598.p1 ORF type:internal len:141 (+),score=44.19,HMG_box|PF00505.15|1.5e-23,HMG_box|PF00505.15|8e+03,HMG_box_2|PF09011.6|6.9e-16 S_Transcript_491598:1-420(+)
GCCAAATCCAAGGGCGCCGCCAAGCCCGACGCCAAGTTGGCTGTGAAGAGTAAGGGCGCGGAGAAGCCCGCCGCCAAGGGCAGGAAGGGGAAGGCCGGCAAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTATGGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGTCGCTGCTGTAGGAAAAGCAGCCGGTGATAGGTGGAAATCCCTGACCGAAGCGGACAAGGCTCCCTATGTAGCCAAGGCCAACAAGCTCAAGGCCGAGTACAACAAGGCCATTGCTGCCTACAACAAGGGCGAGAGCACTGCCAAGAAGGCACCCGCCAAGGAGGAAGAGGAGGACGACGAGGAGGAATCTGACAAGTCCAAGTCCGAGGTCAATGATGAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_491598.p1 GENE.S_Transcript_491598~~S_Transcript_491598.p1 ORF type:internal len:141 (+),score=44.19,HMG_box|PF00505.15|1.5e-23,HMG_box|PF00505.15|8e+03,HMG_box_2|PF09011.6|6.9e-16 S_Transcript_491598:1-420(+)
AKSKGAAKPDAKLAVKSKGAEKPAAKGRKGKAGKDPNKPKRAPSAFFVFMEEFRKEFKEKNPKNKSVAAVGKAAGDRWKSLTEADKAPYVAKANKLKAEYNKAIAAYNKGESTAKKAPAKEEEEDDEEESDKSKSEVNDE

Click here to download the sequence:
Link to NCBI Protein BLAST