Transcript Information: S_Transcript_49177.p1


Annotated TAIR IDAT3G57660.1
Annotated Gene Namenuclear RNA polymerase A1
Annotated Gene Symbol(s)NRPA1
Annotation TypeHomolog
Chromosome Positionchr3:21353746-21362814 | Forward length=1670
E-Value4E-67
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.1535637301803
Replicate 23.8896825520474
Replicate 33.7311893810753
Condition 2: 8 Hour
Replicate 16.6564802145964
Replicate 27.4357300392155
Replicate 35.9142236129428
Condition 3: 24 Hour
Replicate 13.5355880794025
Replicate 22.5545914782588
Replicate 33.2074276122113


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_49177.p1 GENE.S_Transcript_49177~~S_Transcript_49177.p1 ORF type:5prime_partial len:346 (+),score=93.03,RNA_pol_Rpb1_5|PF04998.13|4.4e-17 S_Transcript_49177:2-1039(+)
AGCGATGATGAAGACGGTGACAATGAAGCTGCAGAAGATTTAGGTTCAGCAGCTTCAAGAAGCAAAAAAGCTACAGATGAGATGGATTATGAGAACACTGAAGAGGCAGAAGAAGAAGACGAAAAAGAAGATGATGATGATGAAGAAGAAGAAGAAGAAAAAGAGGAAGAGAGGCGTGCAGCTGAAACTGAAGGTTCAGTGGAGCTGGCGGAGGATGAAGATGGAGACGAAAATCGAGAGCAAGATTCAGGTAGTACCCCTTCGAAGACCAAGTCAAGTGGTGAGGAGGAGAAACCAGAAACTACTACCAAGTCGGAAGACCAGAAGGAGAAACCAGAAGTTAAGCGAAGACAAAGGAGGACAAAAAAGCACGATCGAGCATTTTATTTAGCAAGCGAGGGACTGAATTTTGAAGTTTACTTTAATTTGGGCAATGAACCGCACATATTATTGGCACAGCTTGCCGAGAAGGCAGCTAAGAGAGTATATGTCAGAAGTGCTGGTTCGATTGAGCAATGCAAAGTAGTGGAACTTCATTTGGATGATTGTAGCACGGGAGGGATTCCGATGCTAAAGAAAGGTAAAGAAACCCGGCATGCACTTCAAACTGCTGGGGTGGATTTTACTGCATTTTGGGATATGCGTGATATGCTTGACATCAGGTATATCAATACCAATGACATACATGCTATGCTGAATACATATGGAGTTGAAGCTGCCCGTGCAACCATTATAAAAGAGATTTTCACAGTTTTCAATCACTATGGAGTTTCTGTTGATATGAGACACTTAACCTTGATTGCTGATTACATGACACATACCGGTGGTTATAGACCGATGAGCAGAGCCGGTGGCATAGCTGAATCAATCTCTCCTCTTACTAAGATGTCTTTTGAGACGGCTTCCAAGTTCCTTATTAATGCAGCCTCCCATGCACAAGTGGATAACTTGGAGACTCCTTCGGCCAGAATATGTCTCGGCCTGCCTGCAAAAGTTGGTACTGGATGTTTTGACTTGTTGCATAAAATAGATGTGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_49177.p1 GENE.S_Transcript_49177~~S_Transcript_49177.p1 ORF type:5prime_partial len:346 (+),score=93.03,RNA_pol_Rpb1_5|PF04998.13|4.4e-17 S_Transcript_49177:2-1039(+)
SDDEDGDNEAAEDLGSAASRSKKATDEMDYENTEEAEEEDEKEDDDDEEEEEEKEEERRAAETEGSVELAEDEDGDENREQDSGSTPSKTKSSGEEEKPETTTKSEDQKEKPEVKRRQRRTKKHDRAFYLASEGLNFEVYFNLGNEPHILLAQLAEKAAKRVYVRSAGSIEQCKVVELHLDDCSTGGIPMLKKGKETRHALQTAGVDFTAFWDMRDMLDIRYINTNDIHAMLNTYGVEAARATIIKEIFTVFNHYGVSVDMRHLTLIADYMTHTGGYRPMSRAGGIAESISPLTKMSFETASKFLINAASHAQVDNLETPSARICLGLPAKVGTGCFDLLHKIDV*

Click here to download the sequence:
Link to NCBI Protein BLAST