Transcript Information: S_Transcript_49178.p1


Annotated TAIR IDAT3G57660.1
Annotated Gene Namenuclear RNA polymerase A1
Annotated Gene Symbol(s)NRPA1
Annotation TypeHomolog
Chromosome Positionchr3:21353746-21362814 | Forward length=1670
E-Value2E-64
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.6707587910594
Replicate 21.7290587427519
Replicate 30.92502751516492
Condition 2: 8 Hour
Replicate 14.0110452007147
Replicate 21.4026237391678
Replicate 32.271908522161
Condition 3: 24 Hour
Replicate 10.82175110309445
Replicate 20.85255717528579
Replicate 30.79065969921994


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_49178.p1 GENE.S_Transcript_49178~~S_Transcript_49178.p1 ORF type:complete len:319 (+),score=62.65,RNA_pol_Rpb1_5|PF04998.13|6.5e-19 S_Transcript_49178:78-1034(+)
ATGAGATGGATTATGAGAACACTGAAGAGGCAGAAGAAGAAGAAGAAAAAGAAGAAGATGATGAAGAAGAAGAAGAAAAAGAAAAAGAGTGGCGTGCAGCTGAAACTGAAGGTTCAGTGGAGCTGGCGGAGGATGAAGATGGAGACGAAAATCGAGAGCAAGATTCAGGTAGTACCCCTTCGAAGACCAAGTCAAGTGGTGAGGAGGAGAAACCAGAAACTACTACCAAGTCGGAAGACCAGAAGGAGAAACCAGAAGTTAAGCGAAGACAAAGGAGGACAAAAAAAGCACGATAGAGCATTTTATTTAGCAAGTGAGGGACTGAATTTTGAAGTCTACTTTAATTTGGGCAATGAACAGCACATATTATTGGCACAGCTTGCCGAGAAGGCAGCTAAGAGAGTATATGTCAGAAGTGCTGGTTCGATTGAGCAATGCAAAGTAGTGGAACTTCATTTGGATGATTGTAGCACGGGAGGGATTCCGATGCTAAAGAAAGGTAAAGAAACCCGGCATGCACTTCAAACTGCTGGGGTGGATTTTACTGCATTTTGGGATATGCGTGATATGCTTGACATCAGGTATATCAATACCAATGACATACATGCTATGCTGAATACATATGGAGTTGAAGCTGCCCGTGCAACCATTATAAAAGAGATTTTCACAGTTTTCAATCACTATGGAGTTTCTGTTGATATGAGACACTTAACCTTGATTGCTGATTACATGACACATACCGGTGGTTATAGACCGATGAGCAGAGCCGGTGGCATAGCTGAATCAATCTCTCCTCTTACTAAGATGTCTTTTGAGACGGCTTCCAAGTTCCTTATTAATGCAGCCTCCCATGCACAAGTGGATAACTTGGAGACTCCTTCGGCCAGAATATGTCTCGGCCTGCCTGCAAAAGTTGGTACTGGATGTTTTGACTTGTTGCATAAAATAGATGTGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_49178.p1 GENE.S_Transcript_49178~~S_Transcript_49178.p1 ORF type:complete len:319 (+),score=62.65,RNA_pol_Rpb1_5|PF04998.13|6.5e-19 S_Transcript_49178:78-1034(+)
MRWIMRTLKRQKKKKKKKKMMKKKKKKKKSGVQLKLKVQWSWRRMKMETKIESKIQVVPLRRPSQVVRRRNQKLLPSRKTRRRNQKLSEDKGGQKKHDRAFYLASEGLNFEVYFNLGNEQHILLAQLAEKAAKRVYVRSAGSIEQCKVVELHLDDCSTGGIPMLKKGKETRHALQTAGVDFTAFWDMRDMLDIRYINTNDIHAMLNTYGVEAARATIIKEIFTVFNHYGVSVDMRHLTLIADYMTHTGGYRPMSRAGGIAESISPLTKMSFETASKFLINAASHAQVDNLETPSARICLGLPAKVGTGCFDLLHKIDV*

Click here to download the sequence:
Link to NCBI Protein BLAST