Transcript Information: S_Transcript_49226.p1


Annotated TAIR IDAT5G26800.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: IGR protein motif (InterPro:IPR019083); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G05810.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:9425224-9426485 | Forward length=112
E-Value2.6E-26
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.6165410305925
Replicate 26.5287846649789
Replicate 36.7748826429553
Condition 2: 8 Hour
Replicate 13.046484331019
Replicate 25.4788200750351
Replicate 36.3077508218822
Condition 3: 24 Hour
Replicate 14.2352325134825
Replicate 26.012847969235
Replicate 36.6915628013573


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_49226.p1 GENE.S_Transcript_49226~~S_Transcript_49226.p1 ORF type:complete len:98 (+),score=23.06,IGR|PF09597.6|2.4e+02,IGR|PF09597.6|8.3e-10 S_Transcript_49226:177-470(+)
ATGATGTCAGTATGGCGGCAACTGGCACGAAATGTGTCTATGGCATCATCTCAAATTCAAGTTTCAACATTTGTTCCTGTACCTCATAGATTCTTCTCCAGTTCATCTCCTTACTTAGTGAAGGTGGGGATACCAGAGTTCTTGAATGGGATAGGTAATGGAGTGGAGGCTCATGTTGAGAAGCTCGAGTCCGAGTTTGGGGATCTTCAAAAGTTGCTTGATACTCGTACTCTGAAATTGAAGAAACTTGAAATTCCTTGCAAACATATTGGGACTGTGGAGACCACGAGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_49226.p1 GENE.S_Transcript_49226~~S_Transcript_49226.p1 ORF type:complete len:98 (+),score=23.06,IGR|PF09597.6|2.4e+02,IGR|PF09597.6|8.3e-10 S_Transcript_49226:177-470(+)
MMSVWRQLARNVSMASSQIQVSTFVPVPHRFFSSSSPYLVKVGIPEFLNGIGNGVEAHVEKLESEFGDLQKLLDTRTLKLKKLEIPCKHIGTVETTS*

Click here to download the sequence:
Link to NCBI Protein BLAST