Transcript Information: S_Transcript_49229.p1


Annotated TAIR IDAT5G26800.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: IGR protein motif (InterPro:IPR019083); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G05810.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:9425224-9426485 | Forward length=112
E-Value1.8E-43
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 127.494226441643
Replicate 227.322792365929
Replicate 328.580134063328
Condition 2: 8 Hour
Replicate 124.00871757558
Replicate 224.890533585921
Replicate 326.53893609097
Condition 3: 24 Hour
Replicate 120.25353436214
Replicate 223.414268913313
Replicate 328.061612318275


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_49229.p1 GENE.S_Transcript_49229~~S_Transcript_49229.p1 ORF type:5prime_partial len:151 (-),score=23.38,IGR|PF09597.6|3.6e+02,IGR|PF09597.6|1.5e-17 S_Transcript_49229:337-789(-)
CGCCGTGAATCTCTTTTCTTCGTTCTTCAGTTCTCAAGTGAAGCTTTTAATTTTCTTCAACACCTACAAAATCTGAGGGTTTTAAGTTTTAACAAATTGGAGAAATCGATGATGTCAGTATGGCGGCAACTCACACGAAATGTGTCTACGACTTCATCTCAAATTCAAGTTTCAACATTTGTTCCTCTACCTCATAGATTCTTCTCCAGTTCATCTCCTTACTTAGTGAAGGTGGGGATACCAGAGTTCTTGAATGGGATAGGTAATGGAGTGGAGGCTCATGTTGAGAAGCTCGAGTCCGAGTTTGGGGATCTTCAAAAGTTGCTTGATACTCGTACTCTGAAATTGAAGAAACTTGAAATTCCTTGCAAACATAGAAAGCTGATTTTGAAGTATTCCCACAAATATAGATTGGGACTGTGGAGACCACGAGCTGATCAAGTCAAAGTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_49229.p1 GENE.S_Transcript_49229~~S_Transcript_49229.p1 ORF type:5prime_partial len:151 (-),score=23.38,IGR|PF09597.6|3.6e+02,IGR|PF09597.6|1.5e-17 S_Transcript_49229:337-789(-)
RRESLFFVLQFSSEAFNFLQHLQNLRVLSFNKLEKSMMSVWRQLTRNVSTTSSQIQVSTFVPLPHRFFSSSSPYLVKVGIPEFLNGIGNGVEAHVEKLESEFGDLQKLLDTRTLKLKKLEIPCKHRKLILKYSHKYRLGLWRPRADQVKV*

Click here to download the sequence:
Link to NCBI Protein BLAST