Transcript Information: S_Transcript_49233.p1


Annotated TAIR IDAT5G42905.1
Annotated Gene NamePolynucleotidyl transferase, ribonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:17201414-17202323 | Reverse length=258
E-Value3E-24
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.3509137682833
Replicate 20.83995391716427
Replicate 30.93617949662947
Condition 2: 8 Hour
Replicate 11.4613846156411
Replicate 20.90850146760311
Replicate 33.1378658910886
Condition 3: 24 Hour
Replicate 10.38810706709178
Replicate 20.92035783051157
Replicate 30.7041687524271


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_49233.p1 GENE.S_Transcript_49233~~S_Transcript_49233.p1 ORF type:complete len:394 (+),score=38.54,zf-RVT|PF13966.2|1.7e-19,zf-RVT|PF13966.2|1.6e+04 S_Transcript_49233:879-2060(+)
ATGAAATATTGCAGGGGACGTTGCGATGTGGACATGTTTGAGCCAAGAACTAATGCGTCTAATACTTGGAAAGGGATTCTTGCGAATGCCTCGAACCTAAGGGCAGGGGTGCGAACCGCTGTAGGAAATGGCAAAGGTACCTTATTCTGGTACCATAATTGGATGATGTCTACACCTTTGACACATTATGTGACCCAAGATATACCTGAACCAATTCAAGACTTGACGGTGGATGAGATGTGGGATCCTGCTGTGGGCTGGAAATGGGACAAATTTGCTGAGATTTTACCTGCAGATATTCTCAAAATGTTCGAGGCAGTTGAGCTTTCACCAGACGCTGAGCATGCTGATACTCTGTTTTGGGATGGTTCCCCGTCAGGGGGTTTCACTTTGAAATCAACCTTGTCTATAATTCGAAAAGAGACCAACATGAACGGAGACCGAGTCTGGGATCTTATTTGGAGGATACATGTGCAGCAGCGGGTCCGAATGTTTCTCTGGTTGGTCCTGCATGACCGAGTTCTTTCAAATGCTCAACGTGTCAGGAGGGGGCTGAGCCAAGACCCTAGCTGCTCACTGTGTCATGCGTCGGAAGAGGATGTGGATCATATTATTCGCAACTGCCAAGCTGCAAGGTATGTTTGGGGGGGTTTAGGCATCCCAAATAATGAGCCTAGCTTCTTCACAATGCCATTGAAGGAGTGGATACTTGACAACATTGCAAACAAATCCTGGATTAAGGAAGATAAATGGCCTCAATTTTTTGCGATCACTATTTGGTGGTTGTGGAAATGGCGAAATGCTAGAATCTTCGAGAGAGGGGCCGACATACCTGTTGACCCAATCCGCTTTCTTCATATACGATGGCAAGAACTACAACATGCGTGGCATAGGGGCCCTGACTTAGTGAGCCACATTGGAGTACACCGCGAAGAGAGGCTTGTCTACTGGAGCCCCCCGAATGAGGGGTGGTTTATGCTTAATACTGATGGTGCGGCGCGGGGGAACCCGGGGTTGGCAGGTGGTGGCGGCATTCTAAGGGACTGGACTGGGAGGTTTGTCAAAGCATACTCGGCACGGTTTGGTATCTGTACTTCGTTCAGAGCCGAATTGTTGGCAGTTCATAAAGGGCTCATGCTTGCTTGGGGGGGAAGGAATCCGGCAGCTCCGAGTTTGTGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_49233.p1 GENE.S_Transcript_49233~~S_Transcript_49233.p1 ORF type:complete len:394 (+),score=38.54,zf-RVT|PF13966.2|1.7e-19,zf-RVT|PF13966.2|1.6e+04 S_Transcript_49233:879-2060(+)
MKYCRGRCDVDMFEPRTNASNTWKGILANASNLRAGVRTAVGNGKGTLFWYHNWMMSTPLTHYVTQDIPEPIQDLTVDEMWDPAVGWKWDKFAEILPADILKMFEAVELSPDAEHADTLFWDGSPSGGFTLKSTLSIIRKETNMNGDRVWDLIWRIHVQQRVRMFLWLVLHDRVLSNAQRVRRGLSQDPSCSLCHASEEDVDHIIRNCQAARYVWGGLGIPNNEPSFFTMPLKEWILDNIANKSWIKEDKWPQFFAITIWWLWKWRNARIFERGADIPVDPIRFLHIRWQELQHAWHRGPDLVSHIGVHREERLVYWSPPNEGWFMLNTDGAARGNPGLAGGGGILRDWTGRFVKAYSARFGICTSFRAELLAVHKGLMLAWGGRNPAAPSLC*

Click here to download the sequence:
Link to NCBI Protein BLAST