Transcript Information: S_Transcript_492618.p1


Annotated TAIR IDAT5G26617.1
Annotated Gene NameBEST Arabidopsis thaliana protein match is: Ribonuclease H-like superfamily protein (TAIR:AT3G09510.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:9360462-9360988 | Forward length=142
E-Value0.0004
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.13364301509856
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_492618.p1 GENE.S_Transcript_492618~~S_Transcript_492618.p1 ORF type:5prime_partial len:138 (-),score=13.67 S_Transcript_492618:36-449(-)
CTGACCACGAGCTGGCAATGGATGTCTGTGACAATGCGCGAGCGTTCTTGCATGGCTACAGAACAGCGCAACAGCGGGGAGATGTGGAACGGATGGGGTGTGCATCGCGGATGGACGACTCCTGATAGGGGCATGTGGAAACTAAATTGTGACGCTGGAAAATTGGGTGAATGGGGTGTGGGTTGGGGATTTGTTATCAGAGACTCGGTGGGGGAAATAGTGGTGATGGGAGCTCATCAGATGGAAGGAGCCTTTGAGCCAGAACTAGAGGAGGCTCGATCTATGGTGTTTGGAATGCGAAGGACATGGGAGGCTGGCTATCAGTATCTTGTAGTGGAAAGCAACTATGCTAATCTCATTTCGAAGATAAAAAAACCATACACTAGTGCGTTCTCCTGTTGGCTTTGTTCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_492618.p1 GENE.S_Transcript_492618~~S_Transcript_492618.p1 ORF type:5prime_partial len:138 (-),score=13.67 S_Transcript_492618:36-449(-)
LTTSWQWMSVTMRERSCMATEQRNSGEMWNGWGVHRGWTTPDRGMWKLNCDAGKLGEWGVGWGFVIRDSVGEIVVMGAHQMEGAFEPELEEARSMVFGMRRTWEAGYQYLVVESNYANLISKIKKPYTSAFSCWLCS*

Click here to download the sequence:
Link to NCBI Protein BLAST